Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4530 |
Symbol | rpmD |
ID | 3370070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5394702 |
End bp | 5394878 |
Gene Length | 177 bp |
Protein Length | 58 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637654890 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_237598 |
Protein GI | 66047757 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0070404 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.197222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACCG TTAAAGTAAC GCTGATCAAA AGCATGACCG GCCGCATCCC TAATCACAGA TTGTGCATTA AGGGTTTGGG TCTGCGTCGC ATCGGTCACA CTGTAGAAGT CCTGGATACT CCCGAAAATC GCGGGATGAT CAACAAGGCT TACTACATGC TGCGAGTCGA GGGTTAA
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Protein sequence | MATVKVTLIK SMTGRIPNHR LCIKGLGLRR IGHTVEVLDT PENRGMINKA YYMLRVEG
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