| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4529 |
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| Symbol | rplO |
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| ID | 3370069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5394264 |
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| End bp | 5394698 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637654889 |
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| Product | 50S ribosomal protein L15 |
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| Protein accession | YP_237597 |
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| Protein GI | 66047756 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0200] Ribosomal protein L15 |
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| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0663764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.20573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTCA ATGATCTGAG TCCAGCGCCG GGTTCCCGTC GCGAAAAGCA TCGTCCGGGC
CGTGGTATCG GTAGCGGTTT GGGCAAGACC GGTGGCCGTG GCCACAAAGG TCAAAGCTCC
CGCTCCGGTG GCACCATTGC TCCGGGCTTT GAGGGCGGCC AACAGCCGCT GCATCGTCGC
CTGCCAAAAT TCGGTTTCGT TTCCCTGAAG GCCATGGATC GCGCAGAAGT GCGTTTGTCC
GAGCTGGCTA AAGTGGAAGG CGACATCGTA ACTGTGCAGT CCCTGAAAGA TGCCAACGTG
ATTAACCAGA ACGTTCAGCG TGTGAAAATC ATGCTGTCGG GCGAAGTTAC TCGCGCTGTC
ACTATCAAGG GTATCGCCGC CACCAAAGGT GCGCGTGCGG CTATCGAAGC AGCTGGCGGC
AAGTTCGAGG AATAA
|
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| Protein sequence | MKLNDLSPAP GSRREKHRPG RGIGSGLGKT GGRGHKGQSS RSGGTIAPGF EGGQQPLHRR
LPKFGFVSLK AMDRAEVRLS ELAKVEGDIV TVQSLKDANV INQNVQRVKI MLSGEVTRAV
TIKGIAATKG ARAAIEAAGG KFEE
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