Gene Psyr_4527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4527 
SymbolrpsM 
ID3370067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5392297 
End bp5392653 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content54% 
IMG OID637654887 
Product30S ribosomal protein S13 
Protein accessionYP_237595 
Protein GI66047754 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.20573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTA TTGCAGGCGT TAACATTCCA GATAACAAGC ATACTGTTAT CTCGTTGACC 
TACATCTATG GTGTTGGTCG CACCACCGCA CAGAAAATTT GTGCAACCAC CGGCGTAAAT
CCGGCGGTGA AAATCAAAGA TCTGAGCGAC GAGCAGATTG AACAGCTGCG TGGCGAAGTG
GCGAAGTTCA CCACTGAAGG TGACCTGCGT CGCGAAATCA ACATGAAAAT CAAGCGCTTG
ATGGACCTGG GCTGCTACCG CGGTCTGCGT CATCGTCGTG GTCTTCCAGT GCGCGGTCAG
CGTACCAAGA CCAACGCGCG TACTCGCAAA GGTCCGCGTA AGCCGATCCG CAAGTAA
 
Protein sequence
MARIAGVNIP DNKHTVISLT YIYGVGRTTA QKICATTGVN PAVKIKDLSD EQIEQLRGEV 
AKFTTEGDLR REINMKIKRL MDLGCYRGLR HRRGLPVRGQ RTKTNARTRK GPRKPIRK