| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4519 |
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| Symbol | |
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| ID | 3370059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5383101 |
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| End bp | 5384495 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637654879 |
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| Product | major facilitator transporter |
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| Protein accession | YP_237587 |
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| Protein GI | 66047746 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.301476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.140313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGATA CCCACAGCGA GCGTATGAGT AGCGGCGAGA CCCGCGCAGC AGGCGGTCTG
GCCCTGGTGT TCGCGTTCCG CATGCTTGGC ATGTTCATGG TCTTGCCGGT TCTGGCAACC
TACGGCATGG ACCTGGCAGG CGCGAGCCCT GCACTGATCG GTCTGGCGAT TGGCGCCTAC
GGCCTGACCC AGGCGGTGTT GCAGATACCG TTCGGGATCA TTTCCGACCG TATCGGCCGG
CGACCGGTCA TTTATTTCGG CCTGATCATC TTTGCGATCG GCAGCGTGGT GGCGGCGAAC
GCGGATTCGA TCTGGGGAAT CATTGCCGGA CGTATCCTGC AGGGGGCTGG CGCCATTTCC
GCGGCAGTCA TGGCGCTGCT CTCCGACCTG ACCCGCGAAC AGCACCGCAC CAAGGCCATG
GCCATGATCG GCATGACCAT TGGTCTGTCG TTCGCCATCG CCATGGTTGT CGGCCCGGTG
ATCACCGGCA TGTTCGGGCT TTCCGGATTG TTCCTGGCCA CCGGCGGCAT GGCCTTGATA
GGCGTTCTCA TCGTCGCCTA CGTGGTGCCC AAGGCCAGCG GGGCATTAAT GCATCGCGAG
TCCGGCGTCG CCAAACAGGC GCTGGGGGCG ACGTTGCGTC ATCCGGACCT GCTGCGCCTG
GATTTGGGTA TCTTCGTGTT GCATGCGATG CTCATGTCCA GCTTCGTGGC CTTGCCACTG
GCGCTGGTCG AAAAAGCCGG TCTGCCCAAG GAAGAACACT GGTGGGTCTA CCTGACCGCC
TTGCTGGTTT CCTTCTTCGC GATGATCCCG TTCATCATCT ATGGCGAGAA GAAACGTCAA
ATGAAGCGCG TTCTGCTGGG CGCCGTCACA GTTTTGATGC TGGCTGAGCT ATTCTTCTGG
GCCTACGGGG ACACGTTGCG GGCACTGGTC ATCGGGACAG TGGTATTCTT CACCGCGTTC
AACCTGCTGG AAGCATCCTT GCCGTCGTTG ATCAGCAAGG TTTCACCGGC CGGCGGAAAA
GGCACGGCAA TGGGAGTTTA TTCCACCAGC CAGTTTCTTG GATCGGCCGC AGGTGGGATA
CTGGGCGGCT GGTTGTTCCA GCACGGTGGG CTCGATGTGG TGTTCCTGGG TGGTGCAGCC
ATGGCCGCCG TCTGGCTCGC CTTCGCAGTG ACCATGCGAG AACCGCCTTA CGTGACCAGC
CTACGTCTGC CGTTGTCGCC GCAGGCGCAG CGTGAAGCAG GCCTGGCAGA GCGTTTGATG
TCCGTAGCAG GCGTGACAGA TGCAGTGGTG GTTGCGGAAG AGGCAGCCAT CTACATAAAA
CTCGACACAA AATTATTGGA TCGTGCCTCT CTCGAAAAGC TGGTCAATCC AGCATCAGAA
GCGTGCGAAG CCTAG
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| Protein sequence | MHDTHSERMS SGETRAAGGL ALVFAFRMLG MFMVLPVLAT YGMDLAGASP ALIGLAIGAY
GLTQAVLQIP FGIISDRIGR RPVIYFGLII FAIGSVVAAN ADSIWGIIAG RILQGAGAIS
AAVMALLSDL TREQHRTKAM AMIGMTIGLS FAIAMVVGPV ITGMFGLSGL FLATGGMALI
GVLIVAYVVP KASGALMHRE SGVAKQALGA TLRHPDLLRL DLGIFVLHAM LMSSFVALPL
ALVEKAGLPK EEHWWVYLTA LLVSFFAMIP FIIYGEKKRQ MKRVLLGAVT VLMLAELFFW
AYGDTLRALV IGTVVFFTAF NLLEASLPSL ISKVSPAGGK GTAMGVYSTS QFLGSAAGGI
LGGWLFQHGG LDVVFLGGAA MAAVWLAFAV TMREPPYVTS LRLPLSPQAQ REAGLAERLM
SVAGVTDAVV VAEEAAIYIK LDTKLLDRAS LEKLVNPASE ACEA
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