Gene Psyr_4517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4517 
Symbol 
ID3370057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5381044 
End bp5382201 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content42% 
IMG OID637654877 
ProductSecC motif-containing protein 
Protein accessionYP_237585 
Protein GI66047744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.137001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGGCA TCAAATATAG GGAGCGCGGA ATGGGGCTTT ACGGAAGAAA TGATCCATGT 
TGGTGCGGTT CAGGGTTGAA GTATAAGAGG TGCCACATTG ATCGAGCTCA GCAGCCAAAG
TTGGAGCGGC AAGATTTTGA AGAGCAAACA AAAAAACGCT CTAAGATTTG CAGTGCAGTT
AGCCTCGGCG ATGGCCTTTG TACAAAAAAA ATAGTCCAAG CACATACTAT CTCCAAAAGC
AGTAGCCTCA AACAAATATC TAACCAGGGC CATGTTATAG GTATTAAAGC CAGTATTTCC
GAGCTTGTAT CAACAAACGG TGTAATGAAA CTAAAGTCGG TTGGGATAAA CGAAGCTTCT
ACCTTTACCG GCTTCTGCTC GTACCATGAT AAGCATATTT TTGCTCCACT TGAAGATGAA
TCTATCGTAC TAAGTGATGA GCAACTTTTT TTACTCGCCT ACCGACCTAT AAGCCGAGAG
CTTTACGCTA AAAATGAAAA TATTCTGACA GCGGAATTTT TGAAGTCGAC TGACCGTGGT
ACGCCAGTTG AGATGCAGCA GATAATTCAA ATAGTAGCTA ATGGTCATGG CCTTGGGGCC
AGCATTGCTG TAGGCGAACT TGAGAATATC AAGGCAGAAA TGGATTCTAT CTTACTTCGA
AGAGACTTCA GCGACATGAA CCATTTTGTC ATTGAGCTTT CAGATATCCC CAATATATTA
GTCAGCGGTT CTACACAGCC AGAGTTTGAC TTCTCAGGGG CTCGCCTCCA GAGGTTTGGT
CGTCATCAAG ACCCGATGAG CCATCTTATC TACAACGCTA TTAGCTATGA TAATAAAGGC
TGTTTTGTAT TTTCTTGGAT CAATTCGCAC GATGACGTAT GCCAGAAGTT TATCGACTCA
CTTCTTGGCT TAGGTGATGA TGCTATTTCA ACTGCATTAG TCAAATACTG CTATACTTTC
TGTGAGAACA CTTGGGCATC GCCCTCTTGG TGGAGATCGA TTGAAGATAG TTCAAGAAAT
GAAATTCGAC GTCGAGCCCA ACTCGGTAGC ATGTTAAATC CTCATAAATC AAATGACTTA
GTTTCGGACG CTTTTAGCTT TAATGCTTTT CGGGTAATTA AAACCTCTTT TCGGAAATCT
CCCAAACTGG CTAAGTAG
 
Protein sequence
MSGIKYRERG MGLYGRNDPC WCGSGLKYKR CHIDRAQQPK LERQDFEEQT KKRSKICSAV 
SLGDGLCTKK IVQAHTISKS SSLKQISNQG HVIGIKASIS ELVSTNGVMK LKSVGINEAS
TFTGFCSYHD KHIFAPLEDE SIVLSDEQLF LLAYRPISRE LYAKNENILT AEFLKSTDRG
TPVEMQQIIQ IVANGHGLGA SIAVGELENI KAEMDSILLR RDFSDMNHFV IELSDIPNIL
VSGSTQPEFD FSGARLQRFG RHQDPMSHLI YNAISYDNKG CFVFSWINSH DDVCQKFIDS
LLGLGDDAIS TALVKYCYTF CENTWASPSW WRSIEDSSRN EIRRRAQLGS MLNPHKSNDL
VSDAFSFNAF RVIKTSFRKS PKLAK