Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4517 |
Symbol | |
ID | 3370057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5381044 |
End bp | 5382201 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637654877 |
Product | SecC motif-containing protein |
Protein accession | YP_237585 |
Protein GI | 66047744 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.137001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGGCA TCAAATATAG GGAGCGCGGA ATGGGGCTTT ACGGAAGAAA TGATCCATGT TGGTGCGGTT CAGGGTTGAA GTATAAGAGG TGCCACATTG ATCGAGCTCA GCAGCCAAAG TTGGAGCGGC AAGATTTTGA AGAGCAAACA AAAAAACGCT CTAAGATTTG CAGTGCAGTT AGCCTCGGCG ATGGCCTTTG TACAAAAAAA ATAGTCCAAG CACATACTAT CTCCAAAAGC AGTAGCCTCA AACAAATATC TAACCAGGGC CATGTTATAG GTATTAAAGC CAGTATTTCC GAGCTTGTAT CAACAAACGG TGTAATGAAA CTAAAGTCGG TTGGGATAAA CGAAGCTTCT ACCTTTACCG GCTTCTGCTC GTACCATGAT AAGCATATTT TTGCTCCACT TGAAGATGAA TCTATCGTAC TAAGTGATGA GCAACTTTTT TTACTCGCCT ACCGACCTAT AAGCCGAGAG CTTTACGCTA AAAATGAAAA TATTCTGACA GCGGAATTTT TGAAGTCGAC TGACCGTGGT ACGCCAGTTG AGATGCAGCA GATAATTCAA ATAGTAGCTA ATGGTCATGG CCTTGGGGCC AGCATTGCTG TAGGCGAACT TGAGAATATC AAGGCAGAAA TGGATTCTAT CTTACTTCGA AGAGACTTCA GCGACATGAA CCATTTTGTC ATTGAGCTTT CAGATATCCC CAATATATTA GTCAGCGGTT CTACACAGCC AGAGTTTGAC TTCTCAGGGG CTCGCCTCCA GAGGTTTGGT CGTCATCAAG ACCCGATGAG CCATCTTATC TACAACGCTA TTAGCTATGA TAATAAAGGC TGTTTTGTAT TTTCTTGGAT CAATTCGCAC GATGACGTAT GCCAGAAGTT TATCGACTCA CTTCTTGGCT TAGGTGATGA TGCTATTTCA ACTGCATTAG TCAAATACTG CTATACTTTC TGTGAGAACA CTTGGGCATC GCCCTCTTGG TGGAGATCGA TTGAAGATAG TTCAAGAAAT GAAATTCGAC GTCGAGCCCA ACTCGGTAGC ATGTTAAATC CTCATAAATC AAATGACTTA GTTTCGGACG CTTTTAGCTT TAATGCTTTT CGGGTAATTA AAACCTCTTT TCGGAAATCT CCCAAACTGG CTAAGTAG
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Protein sequence | MSGIKYRERG MGLYGRNDPC WCGSGLKYKR CHIDRAQQPK LERQDFEEQT KKRSKICSAV SLGDGLCTKK IVQAHTISKS SSLKQISNQG HVIGIKASIS ELVSTNGVMK LKSVGINEAS TFTGFCSYHD KHIFAPLEDE SIVLSDEQLF LLAYRPISRE LYAKNENILT AEFLKSTDRG TPVEMQQIIQ IVANGHGLGA SIAVGELENI KAEMDSILLR RDFSDMNHFV IELSDIPNIL VSGSTQPEFD FSGARLQRFG RHQDPMSHLI YNAISYDNKG CFVFSWINSH DDVCQKFIDS LLGLGDDAIS TALVKYCYTF CENTWASPSW WRSIEDSSRN EIRRRAQLGS MLNPHKSNDL VSDAFSFNAF RVIKTSFRKS PKLAK
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