Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4503 |
Symbol | |
ID | 3370043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5367454 |
End bp | 5368347 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637654863 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_237571 |
Protein GI | 66047730 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCC GTGCTCATTT CCCACAGCCA CGTCTGGCGC TGCTGTTTGC CCTGCCGCAA CTGCTGGCGC TCGGCCTGTT CTTTTATTGG CCTGCGGTCC AGGCCATCTG GTGGTCGTTT CATCTGGTGC CGCCCTTCGG CGGTAATGAA ATCTTCGTTG GCCTGAGCAA TTACTGGCGG GTGCTGAGGG ACCCAGGCGT GCTGGCGTCG CTGGGCTCGA CACTGGTGTT CAGCTTGTCG AGCGTCGTGC TTTCGGTCCT TATCGCACTG GTGCTTGCGC TGTGCCTGGA ACTGAAACTG CGCGGCAACG CCGTGGTTCG CAACCTGCTG ATCTGGCCCT ACGCGGTATC GGGCGCCACC ATCGGTATCG TCTTTCATGT GCTGGCCAAT CCGGTGATGG GCATCTTCGC CTGGCTCAAC GCGATTGCAC CCGGCACCTG GGCGCCCTAC GCCAGCCCGA TACAGAGCAT GCTGTTGTTG ATTGTGGCGT ATGCCTGGTG TCTGGTGCCG TTCAACTTCG TGATGCTGGT CGCCAGCCTG AAATCGGTGC CCGACGACTA CCTCGCCGCT GCTGCACTGG ATGGAGCAGG TCCCTTGCGG CGCATGCTCG ACATACAACT GCCCCTGATC GCGCCTTATC TGCTGTTCGT GTTTGTCATC GACCTGCTGG AAAGCCTGTC GAACAGTTTC GGCCTGGTCG ACACCCTCAC CCAAGGCGGA CCTGGCGATA CTACCAATGT GCTGGCCTAC AAGATTTACA CCGACGGTTT CATGGGGCTG GATCTGGCAG GCTCATCGAC CCTGTCAGTG CTCATGCTGC TGGCGGTGGT GGCGCTGAGC GTCGCCCAAT TCACACTCCT GTCGCGCTTC CAGCGTCGTG GGGTGAAAGC ATGA
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Protein sequence | MKPRAHFPQP RLALLFALPQ LLALGLFFYW PAVQAIWWSF HLVPPFGGNE IFVGLSNYWR VLRDPGVLAS LGSTLVFSLS SVVLSVLIAL VLALCLELKL RGNAVVRNLL IWPYAVSGAT IGIVFHVLAN PVMGIFAWLN AIAPGTWAPY ASPIQSMLLL IVAYAWCLVP FNFVMLVASL KSVPDDYLAA AALDGAGPLR RMLDIQLPLI APYLLFVFVI DLLESLSNSF GLVDTLTQGG PGDTTNVLAY KIYTDGFMGL DLAGSSTLSV LMLLAVVALS VAQFTLLSRF QRRGVKA
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