Gene Psyr_4503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4503 
Symbol 
ID3370043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5367454 
End bp5368347 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content60% 
IMG OID637654863 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_237571 
Protein GI66047730 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCC GTGCTCATTT CCCACAGCCA CGTCTGGCGC TGCTGTTTGC CCTGCCGCAA 
CTGCTGGCGC TCGGCCTGTT CTTTTATTGG CCTGCGGTCC AGGCCATCTG GTGGTCGTTT
CATCTGGTGC CGCCCTTCGG CGGTAATGAA ATCTTCGTTG GCCTGAGCAA TTACTGGCGG
GTGCTGAGGG ACCCAGGCGT GCTGGCGTCG CTGGGCTCGA CACTGGTGTT CAGCTTGTCG
AGCGTCGTGC TTTCGGTCCT TATCGCACTG GTGCTTGCGC TGTGCCTGGA ACTGAAACTG
CGCGGCAACG CCGTGGTTCG CAACCTGCTG ATCTGGCCCT ACGCGGTATC GGGCGCCACC
ATCGGTATCG TCTTTCATGT GCTGGCCAAT CCGGTGATGG GCATCTTCGC CTGGCTCAAC
GCGATTGCAC CCGGCACCTG GGCGCCCTAC GCCAGCCCGA TACAGAGCAT GCTGTTGTTG
ATTGTGGCGT ATGCCTGGTG TCTGGTGCCG TTCAACTTCG TGATGCTGGT CGCCAGCCTG
AAATCGGTGC CCGACGACTA CCTCGCCGCT GCTGCACTGG ATGGAGCAGG TCCCTTGCGG
CGCATGCTCG ACATACAACT GCCCCTGATC GCGCCTTATC TGCTGTTCGT GTTTGTCATC
GACCTGCTGG AAAGCCTGTC GAACAGTTTC GGCCTGGTCG ACACCCTCAC CCAAGGCGGA
CCTGGCGATA CTACCAATGT GCTGGCCTAC AAGATTTACA CCGACGGTTT CATGGGGCTG
GATCTGGCAG GCTCATCGAC CCTGTCAGTG CTCATGCTGC TGGCGGTGGT GGCGCTGAGC
GTCGCCCAAT TCACACTCCT GTCGCGCTTC CAGCGTCGTG GGGTGAAAGC ATGA
 
Protein sequence
MKPRAHFPQP RLALLFALPQ LLALGLFFYW PAVQAIWWSF HLVPPFGGNE IFVGLSNYWR 
VLRDPGVLAS LGSTLVFSLS SVVLSVLIAL VLALCLELKL RGNAVVRNLL IWPYAVSGAT
IGIVFHVLAN PVMGIFAWLN AIAPGTWAPY ASPIQSMLLL IVAYAWCLVP FNFVMLVASL
KSVPDDYLAA AALDGAGPLR RMLDIQLPLI APYLLFVFVI DLLESLSNSF GLVDTLTQGG
PGDTTNVLAY KIYTDGFMGL DLAGSSTLSV LMLLAVVALS VAQFTLLSRF QRRGVKA