Gene Psyr_4497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4497 
Symbol 
ID3370037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5360104 
End bp5360832 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content64% 
IMG OID637654857 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_237565 
Protein GI66047724 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCG GAACACTGGG TTTGAATGTT TTGTGGCAAC AGGCCGACGT TGTCACCCGT 
GGCGTGGCCT TGACGTTGCT GGTGATGTCG ATTGCGTCCT GGTACGTGAT GGTCGACAAG
CTGGTGCGCC TGGCACTGCA TCGCCTGCGT TCACCGAAGT TGCTGGAGGC GTTCTGGAAC
GCACCGACGC TCAAGGATGG CGTGCAACAA CTGGGACATC ATAGTGCCTA CGCCGAACTG
ACCCAGGCCG GCGTCAGCGC CGCACGCCAG CACCGTGATG CGCTGAATGG CGACATGCAC
CCGCCGGCCT TCAGCGAATG GCTGACCCGC GCCTTGCGCC AAGCCACCCT GACCGTGGGC
GGGCAGCTAC AAGGCGGCAT GGCGATTTTG GCCACCGTGG GTTCCAGCGC CCCTTTTGTC
GGTTTGCTCG GCACCGTGTG GGGCATCTAT CACGCCTTGA TGAAGATCGG CCTGACCGGC
GACGCGAGCA TCGACAAGGT CGCAGGCCCC GTCGGCGAAA CGCTGATCAT GACCGCCCTG
GGACTGGCAG TGGCCATTCC GGCCACCCTG GGCTACAACC TGCTGGTGCG CAGTAACAAG
CAGACCCTCG CTGAACTGGG CAAGTTTGCC TTCGAACTGC ACGACCTGCT GGTGATCGGC
GCCCGTGCGA CCCCTCGCGG CGGGCAGCCT GCGCGCAGCA CGTTCAACGC CCAGGCGGAG
TTCGTCTGA
 
Protein sequence
MDTGTLGLNV LWQQADVVTR GVALTLLVMS IASWYVMVDK LVRLALHRLR SPKLLEAFWN 
APTLKDGVQQ LGHHSAYAEL TQAGVSAARQ HRDALNGDMH PPAFSEWLTR ALRQATLTVG
GQLQGGMAIL ATVGSSAPFV GLLGTVWGIY HALMKIGLTG DASIDKVAGP VGETLIMTAL
GLAVAIPATL GYNLLVRSNK QTLAELGKFA FELHDLLVIG ARATPRGGQP ARSTFNAQAE
FV