Gene Psyr_4495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4495 
Symbol 
ID3370035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5358171 
End bp5359076 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content58% 
IMG OID637654855 
ProductBeta-lactamase 
Protein accessionYP_237563 
Protein GI66047722 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATTT CACTCTTGTC AAATGGTCAG CCACACACGC CAGAGCGATT GGAACTGATC 
GCCCCCTGGT GGAGTTTTAC GAAAACGGTC CTGGCTGCGA CAGCCCTATC GTTGGTGCGT
GACGGACTGA TCGGATTGGA CGCCCCCATT CCCGACCAGC CTTTCACCTT GCGCCAGCTA
CTGCGGCACG AGGCAGGCCT GGCTGATTAC GGAGAACTTG CGGAGTATCA CACCGCCGTT
GCCAGCGGTG ACCCCGCCTG GCCGGCAGAT GAAATGATGC GACGTCTTGA CGGTACTCGA
CTTCGATACA GTCCCGGAAC CGGCTGGCGT TACTCGAATC TCGGCTACTT GTTCATCGGC
AGGCTAATTG AACGGCTGAC TGATCTGACG CTTGATGATG CGGTGATTCA ACGTGCTCTT
TCGCCTCTGG GCATCTCGAA CGTGCGCTTT GCTAAAACAC GAGCCGATTT ACAAACGACC
CATCAGGGAA GTACCTCGAA TTATGACCCC GCCTGGGTTT ACCACGGTTT GTTGATCGGC
CCGATTTCGC AAGCAGCGCT CTTTCTGGAT CGACTTCTCT GCGCAGACCT CCTCTCCACG
GGCCTGCTTC AGGAAATGCA GACAGCACGA ACACTGGGCG GCCCGATTCC CGGGCGCCCA
TGGATCACGC CGGGCTATGG CCTGGGCTTG ATGCAAGGTT CGATTGACGG TGGGTATTCT
CTATCCGGGC ACACAGGCTG CGGGCCAGGC AGCGTCATTG CTGTCTACCG CATCTGCGAC
GGCGACGCAT CGGCTTGCTG CGCTGCTTTT GAGGCGAATG CCAGTGAAGG TGCTGTTGAA
GCCATCGTTG TCGGGCAACT TATGCAACGT GTGCGGCAGG GGGTTGACGG CATCAAAGTC
CGTTAG
 
Protein sequence
MLISLLSNGQ PHTPERLELI APWWSFTKTV LAATALSLVR DGLIGLDAPI PDQPFTLRQL 
LRHEAGLADY GELAEYHTAV ASGDPAWPAD EMMRRLDGTR LRYSPGTGWR YSNLGYLFIG
RLIERLTDLT LDDAVIQRAL SPLGISNVRF AKTRADLQTT HQGSTSNYDP AWVYHGLLIG
PISQAALFLD RLLCADLLST GLLQEMQTAR TLGGPIPGRP WITPGYGLGL MQGSIDGGYS
LSGHTGCGPG SVIAVYRICD GDASACCAAF EANASEGAVE AIVVGQLMQR VRQGVDGIKV
R