| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4483 |
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| Symbol | |
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| ID | 3370023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5344100 |
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| End bp | 5346406 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637654843 |
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| Product | TonB-dependent receptor:TonB-dependent receptor |
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| Protein accession | YP_237551 |
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| Protein GI | 66047710 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.793937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATC GATCGATACT GCGTGCACCT CGATTCCCGG TAACGCGCCT TGCGCTACTG
GTTTCATTGA ACTCACTGTG CCTGATCAGC CCGTTCATTC AGGCCGATGA CGAGGTGCCC
ACCTCGGCAA CGGTGCCCGC CAGCGACGAC AGCGCCGCCA TGACGCTGGG CACGGTGTCG
GTGATTGGTC AGGGCGAGAC TCGTCAGGTG CAGCGCGTGA CGCAAAAGGA TGTGAAGGCT
TACTCGGCAG GCACCAGCCC GATGAAGGTT CTGCAACGCC TGCCGGGGGT CAACTTCCAG
TCCGGTGACC CGCTGGGCCG TGAGGAAGGC AGCCAGCGCA TCAGCCTGCG CGGCTTCGAT
ATGCACCACC TGGGCTACAC GCTGGACGGC GTCACCCTTG GCAACATGAG CTTCGGCAAC
TTCAACGGTC TGAGCATCAC CCGCGCGATC ATCGCGGAAA ACATCGCCTC CAGCGAAGTG
GCACCCGGCA TCGGATCACT GGGCACGGCA TCGAACAGTG ATCTGGGCGG CACGATCCAG
TTCACCAGTT CCAACCCTGA TAAAGAGTTC GGCGCGCGTC TGTCGCAAAC CCTGGGCAGC
TACGACACGT CACGCACTTT CATGCGGGTC GACACCGGCG AATACAACGG ACTTTCAGCG
TACGTGTCGG GCGAAAAGTA CGACGCCGAC GCCTGGAAAG GCCACAACAA CCCGCAAAAG
TCCGACGCGG TGAACGCCAA GGTCAACTAC AACTTCGGCG ACAACCGGGT GAGTTTCTTC
CACAGCACCT CGTCCCATGA CGAAGCCAAC CTGCCGAACC TGTCGAAGAG CATCATCCAG
CGTCTGGGCT ACAACTGGAG CTACTACACG CCGGACTGGA CCCGCGCGGT CAATGCGGCC
AACGGCATTT ATAGCGGCGG GGTAACCAGC GCAAACGATG CGACCTACAA CGCCAGCAGC
CTGCGCGACG ACGAACTGGA TATCCTCAAC GGCAACTTCT CGCTGACCGA TGATCTGGTC
CTGGACGCCA CCGTCTATCA CCACCATGAC TCGGGCCGGG GCAACTCGTA TTACCCGTTC
GTCTACACCA GCGGCTCGAC GACGGTGCCG AGCAATTCGA TTCGCAGCAC AAAATACGGC
ATTGATCGAA CCGGCTTCCA GAGCTCGCTG ACCTACTACC TCGGCCAGCA TGAAATTCAG
GGCGGGTTCT GGATTCAGTC CAACAAGAAC GACATCTCGC GCTACCTGTT CGATACCACC
AATGCGACGC CGCAGAACCA CATCGTCAAA ACCGATGGCC TGCCCTTGGC GGCCACCGTT
CTGGACCAGA GTTACAATGA CCTGACTCGG CAGTTCTACC TGCGCGACAC CTACACATTG
CTCGATGACC GCCTCAAACT TGAGTTCGGC GCGAAAAATA CCGTGACCAC CTCGACAGCC
GAGGGCAAAG GTGGCGGTTA TGCCAGTGGT TCGCTGCAAG CGCGGGACAG GTTTCTGCCG
CAAGCAGGTG CGACCTACAA ACTCGACGAG GACGACGAAG TCTTCACCTC TTACTCGGAA
AACATGGCCG CATTCCCGAG TGGCGGTTAC AGCCCGTTCT TCACGACGCA GAGCGCCGTC
GATGCGCAGA ACGGCTTCAA GGACCTGAAG CCGGAAACCT CGAAAACCGT CGAATTGGGC
GTGCGCCGCA GCACCAGGCT GTATTCGGCC TCGGCGGCGA TCTACAACAC CAAATTCGAT
AACCGCCTGG TCGCCATCAC CAATTGCACG GGCATCGTCA TCTGCCAGAA CGGCGTCGCC
AACGTCGGTT CGGTCACCAG TCGAGGCCTG GAACTGTCGT TCGGCCTGAC GCCCAATGAG
AACTGGCGCT GGTCCAACTC CATGTCCTAT AACCACAGCA CTTACGACGA TGACTACGCC
AGCGGCGGCA ACACCGTTCA TGTAAAAGGC AAGACCGTCG TCGACACACC GAAACTGATG
TATTCGAGCA ACCTGGACTG GAATTGGGAA CACTGGAACG CCGGCCTGCA AGGCAGTTAC
ATCAGCAAGC GCTATTACAC CTACACCAAT GACTCCAGTG TCAGCGGCTA CTGGCTGGCA
AACGCCAACC TCGGCTATGA CTTCGGCAAA CTCGGCGCCC TCAAGGACAC CACGCTGTCG
CTGAACATGG TCAACCTGTT CGACAAACGC TACATCTCCA CGCTCAACAC CGACGCCAGC
GCAGCCACCG ACCCGGCGGG CAACTTGCAG ATTCTTCAAG TGGGCACACC GCGCAGCGCA
TTCGTAACAC TGGGCGTGAA ACTCTGA
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| Protein sequence | MNNRSILRAP RFPVTRLALL VSLNSLCLIS PFIQADDEVP TSATVPASDD SAAMTLGTVS
VIGQGETRQV QRVTQKDVKA YSAGTSPMKV LQRLPGVNFQ SGDPLGREEG SQRISLRGFD
MHHLGYTLDG VTLGNMSFGN FNGLSITRAI IAENIASSEV APGIGSLGTA SNSDLGGTIQ
FTSSNPDKEF GARLSQTLGS YDTSRTFMRV DTGEYNGLSA YVSGEKYDAD AWKGHNNPQK
SDAVNAKVNY NFGDNRVSFF HSTSSHDEAN LPNLSKSIIQ RLGYNWSYYT PDWTRAVNAA
NGIYSGGVTS ANDATYNASS LRDDELDILN GNFSLTDDLV LDATVYHHHD SGRGNSYYPF
VYTSGSTTVP SNSIRSTKYG IDRTGFQSSL TYYLGQHEIQ GGFWIQSNKN DISRYLFDTT
NATPQNHIVK TDGLPLAATV LDQSYNDLTR QFYLRDTYTL LDDRLKLEFG AKNTVTTSTA
EGKGGGYASG SLQARDRFLP QAGATYKLDE DDEVFTSYSE NMAAFPSGGY SPFFTTQSAV
DAQNGFKDLK PETSKTVELG VRRSTRLYSA SAAIYNTKFD NRLVAITNCT GIVICQNGVA
NVGSVTSRGL ELSFGLTPNE NWRWSNSMSY NHSTYDDDYA SGGNTVHVKG KTVVDTPKLM
YSSNLDWNWE HWNAGLQGSY ISKRYYTYTN DSSVSGYWLA NANLGYDFGK LGALKDTTLS
LNMVNLFDKR YISTLNTDAS AATDPAGNLQ ILQVGTPRSA FVTLGVKL
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