Gene Psyr_4482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4482 
Symbol 
ID3370022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5343623 
End bp5344027 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content62% 
IMG OID637654842 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_237550 
Protein GI66047709 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.728082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCT CCACGTCCAA TGATGACGAT GCAATCAGCG ACATCAACAT CACGCCGTTG 
GTGGATGTGA TGCTGGTACT GCTGGTGACC TTCATCGTCA CCGCACCGCT GCTCAATAAC
GCCATACCGC TGGACCTGCC GCAGACCGTC GCCACCACCT CACTGGATCA GGCCGACCCG
GTGGTGGTGA GTGTCGATGC CAGCGGCGGC GTGTTCATCG ACAGCGAAGC TGTAGCGCTG
GAGCAACTTC CGGAGGCGCT GCAAGCCCTG CACAGCAAAG ACCCGGACGT CGCCGTCAGC
CTGCGTGCCG ATCAGGCGAC GGGTTACGGC CGCGTGGCCC AGGTGCTGGC CGATGTGCAG
AAAGCCGGCA TCAGTCGCCT GTCGGTGATT ACCGAAAGCC CCTGA
 
Protein sequence
MSFSTSNDDD AISDINITPL VDVMLVLLVT FIVTAPLLNN AIPLDLPQTV ATTSLDQADP 
VVVSVDASGG VFIDSEAVAL EQLPEALQAL HSKDPDVAVS LRADQATGYG RVAQVLADVQ
KAGISRLSVI TESP