Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4482 |
Symbol | |
ID | 3370022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5343623 |
End bp | 5344027 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654842 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_237550 |
Protein GI | 66047709 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.728082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTCT CCACGTCCAA TGATGACGAT GCAATCAGCG ACATCAACAT CACGCCGTTG GTGGATGTGA TGCTGGTACT GCTGGTGACC TTCATCGTCA CCGCACCGCT GCTCAATAAC GCCATACCGC TGGACCTGCC GCAGACCGTC GCCACCACCT CACTGGATCA GGCCGACCCG GTGGTGGTGA GTGTCGATGC CAGCGGCGGC GTGTTCATCG ACAGCGAAGC TGTAGCGCTG GAGCAACTTC CGGAGGCGCT GCAAGCCCTG CACAGCAAAG ACCCGGACGT CGCCGTCAGC CTGCGTGCCG ATCAGGCGAC GGGTTACGGC CGCGTGGCCC AGGTGCTGGC CGATGTGCAG AAAGCCGGCA TCAGTCGCCT GTCGGTGATT ACCGAAAGCC CCTGA
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Protein sequence | MSFSTSNDDD AISDINITPL VDVMLVLLVT FIVTAPLLNN AIPLDLPQTV ATTSLDQADP VVVSVDASGG VFIDSEAVAL EQLPEALQAL HSKDPDVAVS LRADQATGYG RVAQVLADVQ KAGISRLSVI TESP
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