Gene Psyr_4478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4478 
Symbol 
ID3370018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5340075 
End bp5340893 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content60% 
IMG OID637654838 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_237546 
Protein GI66047705 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.785695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGT TCAACACCAA AGATGGCACC GAGATCTATT ACAAGGATTG GGGCACGGGC 
AAACCGGTCC TGTTCAGCCA CGGCTGGCCG CTGGATGCGG ACATGTGGGA ATACCAGATG
CAATACCTGA GCAGCCGGGG CTATCGCACC ATCGCCTTCG ACCGTCGCGG GTTCGGTCGT
TCCGATCAGC CGTGGACCGG CTATGACTAT GACACCTTCG CTGACGACAT CGCCGAACTG
ATCGAGCACC TCGATCTGCG CGAGGTGACG CTGGTGGGCT TCTCCATGGG CGGCGGCGAC
GTCACCCGCT ACATCGCCAA ATATGGCAGC GAGCGGGTGG CCAAACTGGC GTTGCTGGGC
TCGGTTACGC CGTTTTTCCT CAAGACCGGT GACAACCCGG AAGGCGTCGA TCAGTCGGTA
TTCGATGGCA TCACGGCAGG GCTGCTCAAG GACCGTGCTC AATTCATCAG CGACTTTGCC
AGCACGTTCT ACGGCATCAA CCACGGCCAG AAAGTCTCCG AAGGCGTACA GACGCAGACA
CTGAACATTG CGCTGCTCGC TTCACTCAAG GGCACGCTGG ATTGCGTAAC AGCGTTCTCC
GCAACCGACT TCCGCCCGGA CATGGCAAAA ATCGATGTGC CGACCCTGGT GATTCATGGT
GACGACGATC AGGTGGTGCC GTTCGAAGCC TCGGGCAAAC GGGCTGCCGC GATGATCAAG
GGGGCCGAAC TGAAGGTCTA CCCAGGCGCA CCGCACGGGT TTGCAGTGAC CCATGCAGAG
ACGCTCAACA AAGACCTGCT GACGTTTGTG CAGGGCTGA
 
Protein sequence
MSTFNTKDGT EIYYKDWGTG KPVLFSHGWP LDADMWEYQM QYLSSRGYRT IAFDRRGFGR 
SDQPWTGYDY DTFADDIAEL IEHLDLREVT LVGFSMGGGD VTRYIAKYGS ERVAKLALLG
SVTPFFLKTG DNPEGVDQSV FDGITAGLLK DRAQFISDFA STFYGINHGQ KVSEGVQTQT
LNIALLASLK GTLDCVTAFS ATDFRPDMAK IDVPTLVIHG DDDQVVPFEA SGKRAAAMIK
GAELKVYPGA PHGFAVTHAE TLNKDLLTFV QG