Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4478 |
Symbol | |
ID | 3370018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5340075 |
End bp | 5340893 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637654838 |
Product | Alpha/beta hydrolase fold |
Protein accession | YP_237546 |
Protein GI | 66047705 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.785695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGT TCAACACCAA AGATGGCACC GAGATCTATT ACAAGGATTG GGGCACGGGC AAACCGGTCC TGTTCAGCCA CGGCTGGCCG CTGGATGCGG ACATGTGGGA ATACCAGATG CAATACCTGA GCAGCCGGGG CTATCGCACC ATCGCCTTCG ACCGTCGCGG GTTCGGTCGT TCCGATCAGC CGTGGACCGG CTATGACTAT GACACCTTCG CTGACGACAT CGCCGAACTG ATCGAGCACC TCGATCTGCG CGAGGTGACG CTGGTGGGCT TCTCCATGGG CGGCGGCGAC GTCACCCGCT ACATCGCCAA ATATGGCAGC GAGCGGGTGG CCAAACTGGC GTTGCTGGGC TCGGTTACGC CGTTTTTCCT CAAGACCGGT GACAACCCGG AAGGCGTCGA TCAGTCGGTA TTCGATGGCA TCACGGCAGG GCTGCTCAAG GACCGTGCTC AATTCATCAG CGACTTTGCC AGCACGTTCT ACGGCATCAA CCACGGCCAG AAAGTCTCCG AAGGCGTACA GACGCAGACA CTGAACATTG CGCTGCTCGC TTCACTCAAG GGCACGCTGG ATTGCGTAAC AGCGTTCTCC GCAACCGACT TCCGCCCGGA CATGGCAAAA ATCGATGTGC CGACCCTGGT GATTCATGGT GACGACGATC AGGTGGTGCC GTTCGAAGCC TCGGGCAAAC GGGCTGCCGC GATGATCAAG GGGGCCGAAC TGAAGGTCTA CCCAGGCGCA CCGCACGGGT TTGCAGTGAC CCATGCAGAG ACGCTCAACA AAGACCTGCT GACGTTTGTG CAGGGCTGA
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Protein sequence | MSTFNTKDGT EIYYKDWGTG KPVLFSHGWP LDADMWEYQM QYLSSRGYRT IAFDRRGFGR SDQPWTGYDY DTFADDIAEL IEHLDLREVT LVGFSMGGGD VTRYIAKYGS ERVAKLALLG SVTPFFLKTG DNPEGVDQSV FDGITAGLLK DRAQFISDFA STFYGINHGQ KVSEGVQTQT LNIALLASLK GTLDCVTAFS ATDFRPDMAK IDVPTLVIHG DDDQVVPFEA SGKRAAAMIK GAELKVYPGA PHGFAVTHAE TLNKDLLTFV QG
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