| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4462 |
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| Symbol | |
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| ID | 3370002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5324768 |
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| End bp | 5325868 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637654822 |
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| Product | riboflavin biosynthesis protein RibD:riboflavin-specific deaminase, C-terminal |
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| Protein accession | YP_237530 |
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| Protein GI | 66047689 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAG CACTCGAGCT GGCGCGCAAG GGGCTGTACT CCACGCATCC CAACCCGCGA
GTCGGCTGCG TGATCGTGCG TGAAGGCCGG ATCGTTGGCG AAGGCTGGCA TGCGCGCGCC
GGTGAACCGC ATGCCGAAGT GCATGCCTTG CGCCAGGCCG GCGAGCTGGC CAGAGGCGCG
ACCGCCTACG TCACCCTCGA GCCGTGCAGT CACCAGGGGC GCACACCGCC CTGTGCCGAT
GCACTGATCG AAGCCGGGCT GACGCGGGTT GTCGCAGCGA TGCAGGACCC CAACCCCGAA
GTTTCCGGTC GCGGCCTGTT GCGCCTCATG AATGCCGGCA TCGGCGTTCA GTGTGGTGTG
CTGGAAAGCG AAGCGCGAGC GCTGAACAAA GGCTTTCTCA AGCGCATGGA GACCGGCCTG
CCGTATGTGC GGGTCAAAAT GGCCATGAGC CTGGATGGCC GAACGGCGAT GGCCAGCGGG
GAAAGCCAGT GGATCACCGG CCCCGAGGCG CGCTCTGCCG TACAGCGCCT GCGCGCCCAG
TCGAGCGTGG TGCTCAGCGG TGCCGACACG GTGCTGGCCG ACAAGGCTCG TCTCACCGTA
CGCCCTGATG AACTGGGGCT CGATGCCGAA TTGACCGCGC TGGCCGCGGC ACGCGCGCCG
TTGCGCGTGT TGATCGACGG CCGTTTGCGT GTGCCGCTCG ATGCACCGTT CTTCCAGGCA
GGCAGTGCGC TGGTCGTGAC CTGCGCTGCT GCGTCGGCGC GAGGCCGCTA TCAGGAGGAG
GGCCACGAAA TGCTCGCGCT GGCCGACAGC GCCGGTCATG TGGACCTGCG CAGGTTGATG
GACGAACTCG CAGCGCGGGG CGTCAATGAA GTGCTGGTCG AGGCCGGTCC GCGACTGGCG
GGGGCTTTTG CGCGGCTCGG GCTGGTCGAC GAGTTTCAGC TCTTCATTGC CGGCAAGTTT
CTCGGCTCAT CGGCCCGTCC GCTGCTCGAT CTGCCACTGG CGCAGATGAG CGAGGCACTG
GAACTGAACA TTGTGGAAAT GCGTGCTGTC GGTAATGACT GGCGAGTCAT CGCTCTCCCT
GTGCGCACAC CCGGCGTATA A
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| Protein sequence | MARALELARK GLYSTHPNPR VGCVIVREGR IVGEGWHARA GEPHAEVHAL RQAGELARGA
TAYVTLEPCS HQGRTPPCAD ALIEAGLTRV VAAMQDPNPE VSGRGLLRLM NAGIGVQCGV
LESEARALNK GFLKRMETGL PYVRVKMAMS LDGRTAMASG ESQWITGPEA RSAVQRLRAQ
SSVVLSGADT VLADKARLTV RPDELGLDAE LTALAAARAP LRVLIDGRLR VPLDAPFFQA
GSALVVTCAA ASARGRYQEE GHEMLALADS AGHVDLRRLM DELAARGVNE VLVEAGPRLA
GAFARLGLVD EFQLFIAGKF LGSSARPLLD LPLAQMSEAL ELNIVEMRAV GNDWRVIALP
VRTPGV
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