Gene Psyr_4454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4454 
Symbol 
ID3369994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5319082 
End bp5319654 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content65% 
IMG OID637654814 
ProductHupE/UreJ protein 
Protein accessionYP_237522 
Protein GI66047681 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2370] Hydrogenase/urease accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTACA AAAAAGCCCT TGGCGCCCTC GCGCTGTTGC TGGTCCCGAC TCTGGCGCTG 
GCTCACCCCG GTCATGGCGA TAACGGCCTG ATCGCCGGTA TCAGCCACCC GATCGGCGGG
CTGGATCATT TGCTGGCAAT GCTTGCCGTC GGCTTGTGGG CTGCGCAGCA ACAAGGTTCG
GCACGCTGGG CGCTGCCGTG CACCTTCGTC GGCACCATGC TGATCGGCGG CATGCTGGGC
TTTGAAGGTC TGAACCTGCC AGCGCTGGAA AGCGGCATTG CCGCATCGGT ACTGGCTCTG
GGCCTGGCCG TGGCATTGGC AGTACGTCCG CCGCTGGCGC TGGCGGTAGC CGCAACAGCC
CTGTTCGCCT TGTTCCACGG CGTGGCGCAT GGCCTTGAAC TGCCGGAAAT GTCCAGCCCA
TGGGCCTACG CAGCAGGTTT CGTTGCAGCG ACCGCGGCCT TGCATGCGCT GGGTTATGCA
GTGGTTCGCG TGTTGCCGCA GGCGGCAGCA CCGCTGGTGC GTATCGCCGG TGCAGCTTCT
GCGGCAGCGG GAGTATGGTT GCTGGCAGCC TGA
 
Protein sequence
MNYKKALGAL ALLLVPTLAL AHPGHGDNGL IAGISHPIGG LDHLLAMLAV GLWAAQQQGS 
ARWALPCTFV GTMLIGGMLG FEGLNLPALE SGIAASVLAL GLAVALAVRP PLALAVAATA
LFALFHGVAH GLELPEMSSP WAYAAGFVAA TAALHALGYA VVRVLPQAAA PLVRIAGAAS
AAAGVWLLAA