Gene Psyr_4452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4452 
Symbol 
ID3369992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5317743 
End bp5318417 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID637654812 
Producturease accessory protein UreF 
Protein accessionYP_237520 
Protein GI66047679 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGCG CCTGGGCGCT GTTGCGCCTG GCCAGTCCGC AGTTGCCTAT CGGTGGCTAC 
AGCTATTCGC AAGGGCTGGA AATGGCAGTG GAGCAATCCA TTGTGGTGGA CCCGCAGACT
GCGGGCCGCT GGATCGGCGA TCAACTGCTG CTCAACCTCG CGCGTTTCGA GGCCCCGCTG
CTGCTGGCTC ATTGCGATGC AGCGGCAGCC GGTGACTGGG GCCAGTTGCT GCAAGTCAGC
GAGCAGCATC GCGCCAGCCG CGAGACTCGC GAGCTGCATC TGGAAAGCCG GCAGATGGGC
TACTCGCTGA AGCAGTTGCT CAATGGCCTG CCTGAACTGG ATCGTGATGC ACGGCATTTT
CTGCAGCAGA CTGCCGAGCC GCACCTGGCC CTTGGCTGGG CGCTGGCCGC ACGCGCCTGG
CAGATCAGCC CGCAGGATGC GCTGGCCGCC TGGCTATGGA GCTGGCTTGA AAACCAGCTG
GCCGTGCTGA TGAAAACCCT GCCGCTGGGC CAGCAAGCCG CCCAGCGCCT GACCAGCGAG
CTGTTGCCGT TATTGCAGCA GGCGCAGGTC AGTGCCAGCG CACAAGATCC CTGCCATGCC
GGCAGCGCAG CCTTCGGTCT GTCCCTGGCG AGCATGGCGC ACGAACGTCA ATACAGCCGG
TTATTCCGGT CCTGA
 
Protein sequence
MNSAWALLRL ASPQLPIGGY SYSQGLEMAV EQSIVVDPQT AGRWIGDQLL LNLARFEAPL 
LLAHCDAAAA GDWGQLLQVS EQHRASRETR ELHLESRQMG YSLKQLLNGL PELDRDARHF
LQQTAEPHLA LGWALAARAW QISPQDALAA WLWSWLENQL AVLMKTLPLG QQAAQRLTSE
LLPLLQQAQV SASAQDPCHA GSAAFGLSLA SMAHERQYSR LFRS