Gene Psyr_4442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4442 
Symbol 
ID3369982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5309463 
End bp5310473 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content59% 
IMG OID637654802 
Producthypothetical protein 
Protein accessionYP_237510 
Protein GI66047669 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.978049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACGT TTTCTGCGCG TCAGGTGTTA ATAGCCAGCT GGATTCTTGT ATTTGGCGGT 
CTGTTATTGG TGTTGCCATT CAAGTTATTG CCCAGCCTGC TGGCCGGACT GTTGGTGTTC
GAGCTGGTCA ACATGTTGAC CCCCAAGCTG CAACGTCTGA TCTCCGGCGA ACGGGCGCGC
TGGCTGGCTG TGGCACTGCT TGGCACGCTG GTGGTCAGCC TGTTGACGCT GATTTTTGCC
GGAGCCATCA GCTTTGTGCT GCATGAAGCC GAAAACCCCG GAGCCTCGCT CGACAAGTTC
ATGACCCTGG TCGATCGCGC GCGTGGTCAG TTGCCACCGT TCATCGATGC CTATCTGCCT
GCCAGCGCCG CGGAGTTTCA GGTTTCGCTC GGGCAGTGGC TGCAGAAACA CGTCGGCGAG
TTGCAATTGA TCGGCAAGGG CGCGGCGCAC ATGTTCGTCA CCATGCTGAT CGGCATGGTG
CTGGGCGCGA TCATTGCCTT GCAGCGTATC TCCGATGTGC ATGCGCGCAA GCCGCTGGCA
GCCGCGCTGT TCGATCGGCT GTACCTGGTC AGCCGGGCGT TTCGCAACAT CGTTTTCGCC
CAGATCAAGA TTTCCCTGCT CAACACCGCG TTTACGTCGG TATTTCTGGC CGTCGTGCTG
CCGCTGTGCG GGATTCACCT GCCGCTGACC AAGACCCTGA TCATCATGAC CTTCCTGCTC
GGCCTGTTGC CGGTGGTGGG TAACCTGATG TCCAACACCC TGATCTTCAT CGTCGGCATG
TCCATCTCGA TCTGGGTCGC ACTGGCTGCG CTGGGCTACC TGATCGTGAT CCACAAGGTC
GAGTACTTCC TCAATGCGCG CATCGTGGGC GGGCAGATCA ATGCCAAGTC GTGGGAGTTG
CTGCTGGCGA TGCTGCTGTT CGAAGCCGCA TTCGGCCTGC CGGGTGTGGT CGCAGGGCCG
ATTTACTATG CGTACCTGAA GAGCGAGTTG CAGAAGGAAG GGTTGGTCTA G
 
Protein sequence
MPTFSARQVL IASWILVFGG LLLVLPFKLL PSLLAGLLVF ELVNMLTPKL QRLISGERAR 
WLAVALLGTL VVSLLTLIFA GAISFVLHEA ENPGASLDKF MTLVDRARGQ LPPFIDAYLP
ASAAEFQVSL GQWLQKHVGE LQLIGKGAAH MFVTMLIGMV LGAIIALQRI SDVHARKPLA
AALFDRLYLV SRAFRNIVFA QIKISLLNTA FTSVFLAVVL PLCGIHLPLT KTLIIMTFLL
GLLPVVGNLM SNTLIFIVGM SISIWVALAA LGYLIVIHKV EYFLNARIVG GQINAKSWEL
LLAMLLFEAA FGLPGVVAGP IYYAYLKSEL QKEGLV