| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4426 |
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| Symbol | |
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| ID | 3369966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5293554 |
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| End bp | 5294819 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637654786 |
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| Product | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | YP_237494 |
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| Protein GI | 66047653 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.171999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCGTC GCAGCCTGAT CAAAGCCTTT ACCCTTTCCG CATCCATCGC CGCCATGGGG
CTGACCTGGA CCGTTCAGGC TGCCGAGACC ATCAAGGTCG GCATTCTGCA TTCGTTGTCC
GGCACCATGG CCATCTCCGA GACGTCGCTC AAGGACATGG CCTTGATGAC CATCGACGAG
ATCAACGCCA AAGGCGGCGT CAACGGCAAG ATGCTGGAGC CGGTCGTTGT GGACCCGGCG
TCCAACTGGC CGCTGTTCGC GGAAAAAGGC CGTCAGTTGC TGACCCAGGA CAAGGTCGCC
GTGGTGTTCG GCTGCTGGAC ATCGGTGTCG CGCAAATCGG TACTGCCGGT CTTCGAAGAA
CTCAACGGCC TGCTGTTCTA CCCGGTGCAG TACGAAGGCG AAGAAATGTC GCCCAATGTT
TTCTACACCG GCGCCGCGCC TAACCAACAG GCTATCCCGG CCGTCGACTA TGTCATGAGT
GAAGATGGCG GCGCTGCCAA GCGCTTCTTC CTGCTTGGCA CCGACTATGT CTACCCGCGC
ACCACCAACA AGATTCTGCG CGCATTCCTG CATTCCAAAG GCGTGAAAGA TACCGATATC
GAAGAGGTTT ACACGCCGTT CGGTCACTCC GATTATCAAA CCATCGTGGC CAACATCAAG
AAGTTCTCCG CGGGTGGCAA GACGGCCGTT ATCTCCACCG TCAACGGCGA CTCCAACGTG
CCGTTCTACA AGGAACTGGC CAACCAGGGC CTGAACGCTA CCGACGTACC GGTTGTGGCC
TTCTCGGTAG GCGAAGAAGA ACTGCGCGGC ATCGACACCA AGCCATTGGT AGGCCATCTG
GCCGCCTGGA ACTACTTCCA GTCGGTGGAA AACCCGGTCA ACAAGAAGTT CGTGGCTGAC
TGGAAAGCCT ACGCCAAAAA GAAAAACCTG CCAGGCGCTG ACAAGGCCGT GACCAACGAC
CCGATGGAAG CCACCTACGT CGGCATTCAC ATGTGGGCGC AGGCGGTCGA GAAAGCCAAA
TCCACCGACG TGGACAAGGT CCGTGAAGCC ATGGCCGGCC AGACGTTCGC AGCGCCGTCG
GGCTTTACCC TGACCATGGA CAAGACCAAC CACCACTTGC ACAAGCCAGT GATGATCGGC
GAAATCCAGG ACGACGGTCA GTTCAACGTC GTCTGGCAGA CCAAAGAGCC GATCCGCGCC
CAGCCATGGA GCCCGTACAT CCCTGGCAAC GACAAGAAGC CGGACGCCCC GGCGAAGAGC
AACTGA
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| Protein sequence | MKRRSLIKAF TLSASIAAMG LTWTVQAAET IKVGILHSLS GTMAISETSL KDMALMTIDE
INAKGGVNGK MLEPVVVDPA SNWPLFAEKG RQLLTQDKVA VVFGCWTSVS RKSVLPVFEE
LNGLLFYPVQ YEGEEMSPNV FYTGAAPNQQ AIPAVDYVMS EDGGAAKRFF LLGTDYVYPR
TTNKILRAFL HSKGVKDTDI EEVYTPFGHS DYQTIVANIK KFSAGGKTAV ISTVNGDSNV
PFYKELANQG LNATDVPVVA FSVGEEELRG IDTKPLVGHL AAWNYFQSVE NPVNKKFVAD
WKAYAKKKNL PGADKAVTND PMEATYVGIH MWAQAVEKAK STDVDKVREA MAGQTFAAPS
GFTLTMDKTN HHLHKPVMIG EIQDDGQFNV VWQTKEPIRA QPWSPYIPGN DKKPDAPAKS
N
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