Gene Psyr_4425 details

Gene Information

• Locus tag: Psyr_4425
• ID: 3369965
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. syringae B728a
• Kingdom: Bacteria
• Replicon accession: NC_007005
• Strand: +
• Start bp: 5289872
• End bp: 5293318
• Gene Length: 3447 bp
• Protein Length: 1148 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637654785
• Product: hypothetical protein
• Protein accession: YP_237493
• Protein GI: 66047652

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.385232
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.669526
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACTTAC CGCTCACGAC ATCACCCCCA CCTCTACCCG CCTCGCTTGC CAGCGATAGC 
TATCCACCCG GTTTCAGCAA GACGACGCAA GAGCTCGCCC GTAGCCTGCT GCACCCGCTC 
AAACCCGACC TGGATGTCGA GACCACATGG CTGACCTACC GCGACAGCAA GGTCGCAGCG 
GACGACGGCG CCAACATACA CAGCGTTCCG TTGATCTCCA GCCTGGTCGA GCATTTCACC 
GGCCTTTTGA ACTGGACCGA CAATGATGTG CAGGGTCTTT ACCCGACCCC GTCGTCCACT 
TCGCAGACAC CGGCCATCCA GCCGCTGGGT CGAGCGGCTA TCGTGGATTT CTACACTCGG 
GTCAGCCAGC AGCTGGAGCA ATTCTATAGC CAGAAACTTG CAGACTATTG GGCCATCGCA 
ACGCCGGACG GTGAAACCCG GAGCAACCGG TATCTGGCCG AGCAGATCGA GTGTCTGAAA 
TCCGAATGCG CGGTGCTGAT CGCCTCGGGA AAAATGGCGA CCGGGCACTA CAGTCTGCTA 
TCGGCAGCAC TGGGGCCATG TGCCACACGC CCGGCCGGAA ACATCGCGCA AATTCAACCC 
CACAGCATTT TCAGCCTCTC GACCCGTATC GGTGATGGCC CTGCAATTGC GATCTCCGGT 
GCGTTTGCCA TCGCTCGACG TCTTCGTAAA GAACCGCTGT TACAGCTTGA CGAAGAGGAG 
CTTGAGGACG TCCTGCTGTT CACTCCTTAT GACGGGCTGG AGGCATTTGC ATCCCTGACA 
CACATGAATG AGCGCCTTGC TCAACGCGCA ACAGAGCCTG ACTACAGGCG ACGCCTGGGG 
ATTGAGCCTG CGGCTGAACA GGCAAGCCAG GCCGCCTCCG GTTTCATCGC GCTGCAATGG 
CAGTACACCT TGCTGGAAGG CAATTTTCTG AGCCTGTTGC ACACCCGCCA GATCGCCCGA 
CAGCAATCAA TGTTCGCTCA GGCCGTACAG CTTGCTCGTG CTCAACGGAT GGACGAGGTT 
TGTTTCGAGC AATTGATAAC GCATTTGCTG AAGCCAGAGC TTTACTTTGA CAACCATTGG 
CGCCTGGACA GGCTCGATAA CGACCTGGTT CAGAGCCAGA TGCCTGACTG GTGGAAAACC 
ATGCAGGCGT CGCAACGCGA GGAATGGCTT GCGCAGGCAC AACAGTTTGG TGAGTCGGTT 
GTCAGCATCC GGCAAGTCAG CAAGGCTAAC TTCGACCCGC CGGACAATGA TAGCCGTACC 
TATCTCACGC GCTATATCGA CAAGCATCTG GATGAAGTAT TGAAACAGGC ATCTGTCGAA 
ATAGCCGCGC AGCAGATTAC CGTTTCGATT AATTACAGGC TTGGCACCGA AGTGCTGGAG 
ATCCCCGGCG CACCTGTGCT GCCGACAACC GAAACTGAAA ACATTTCGCT CTGGCAACTG 
GCGCATACCC ATGCCCACCG TGCCAGGGCC GCAGATGCAG TGCTGATCCA CGCTGTCGAT 
GAGGCAGGCG CCGTCATCCA GAAACTGGAC ATGGCCACTA TAAAGAGGCT GGTCACAGCC 
ATAGAGAACC CTCAGCACCT TAGCGACTAC CTCGATCTCA ATCTGAAGAC ATCAGCGTAT 
GCGCGACAAC TCAAGCAGTT GCAGAAAGCC ATGCTGGAAG CCCAGATGAA GATGGCCCTG 
CTGGAGATCG AACAGCAGGC TTTTGCACCG GCCGGTCTTG AGTGGATCGA GGCAGTGCTT 
GATTCGCCGG CACCGCAAGG GCGTCGGACC ATCAAAGGGG AAGCCATCGA GGTCCGGTTT 
TTCAGCGTCA ATCAATTCAT GATGACCAAT GTCATGCTGA TTGCTCCAGC CGACAAATTC 
GAGCGGGGGC CACTGGTGCT GTGCACGCTG GATGCTGCCG ACGGCGTCGT CTTCCGCTGG 
TTCAACAGCA TGTATCACCT GACCACCGGT TTTTTGGAAA AAGCGCCATT CCAGCAGTAT 
CTGATTGAGC AAATACCGGT TTCCAGGCGC CTGGAAACGC TGCGTGCCAT GCAGTACGAA 
AAGCAGGCCA AGCACTGGCG CATGCCAGAG GTTTTTACCC AACTGTCGCT GATACCGATC 
CCGGCGAGGC TGCTGCACCC GGTGGTATTT GTCAGCCAAA GCAAAGACCT TTATGTGGAA 
ATCCACGAGA CCAGGATCAA TCAGTTGATC AGCGAAGCCA AACGGCAAAT GAGCCTGGCC 
AACGGCATGG GGCGATCAGG CCGAACCTTC GATCTGATCG CCAACATCGG AATTCTGTTT 
TTGCCTGACC CGATCATGAT GCCTGTCGCA CTGGGCGTGG GCCTGTACAA GACCTGGAGC 
GCCTTCTCGA AACTCGACGA AGGCGACCTC GAAGGTGCAG CCGAGGAATT TCTGAGCGCC 
GTAGGCTATC TTGCTACCGC TTTCATTGGC CGCCTGGCGC TCGCCCTGAA GCCGGCAATG 
CATGCCTCGA AGGTGGTAAG ACGCCCGCAC CTGATCCGCA GGGTCGGCCG CGACGGGCAG 
ATCCAGATCG GCTACCTCCT GTCGCACTCC AGAGCCCCCC GCTTTGCAGA CCCCAAATTG 
ATCGTCGCTA TGGACTCCCA ACGGTTCATC GCCATCGATA TAGAGGGCCA GACCTTTTTC 
GTAAGCCGAC GTACCAATAT GTTTGGTCAC TCGCGCCTTT ATCGGCGATC CCCGACTGAC 
GCAACGCTAC TGGTGCATGA GCAGGAATAC GCATTGCGCA CCACCAGCGG GGCCTGGAAA 
ACCGTGGGCA AACAGATACC ACGCATCAGT CAGTCCGCCA TCCGTAATGC CCGATCACAA 
CTGGCCAGCC TGACCACTGC CTGGCCTGTG TCCCTGGAAG AGACAGGTAG CGCCGAACGC 
TTGAAGTTCG AGGCCGACTA CCTCGCCCTG GGCGCAGCGT CCAACGCCGA AAACCTTTCC 
GAAATAGCGG CTTATGCGGA AGGTGGCTCG ACGGACATCA ACCCTCTGTT ACGAAGCGGT 
GTGCGCAATG CCACAACACG CAACTTTCTA AGCCAGTTCT ATCAGCTCAA AGCATGGGAT 
GGCACTGCTT TTCGCTCGAC GTACGTATCA AGCGAAGGGA TGGCCTGTCT GGAGCACGAA 
GCAGGTGCGG TGTTTACCGA CAGTGGCGTG CAGTCCGCCT CGATATCGCG AGCCAATGCC 
TTCCTGTGGA GCCGGGATGG ATTTGTGAGC AGTAACGCCA ATGCAGAAAA TCACCCGGTC 
TTTTTCATCT TTGCCCCGGG CATACCGAAA AAAAACATGT TTACCGGCTT CCTCGGTGAT 
CACGTCGCCG TCGCACCGGG CACGCGCATG CAACTGGGGG CGACAACGCG AATCAACGGT 
CAGCTGTTTG CGTGGTTCGA CGCTCCCGAG CAACTCACTG ATCAGACGTT TGACCTGTAC 
ACCGGAGCAA AGGAGCTATG GGTCTGA 

 

Protein sequence

MNLPLTTSPP PLPASLASDS YPPGFSKTTQ ELARSLLHPL KPDLDVETTW LTYRDSKVAA 
DDGANIHSVP LISSLVEHFT GLLNWTDNDV QGLYPTPSST SQTPAIQPLG RAAIVDFYTR 
VSQQLEQFYS QKLADYWAIA TPDGETRSNR YLAEQIECLK SECAVLIASG KMATGHYSLL 
SAALGPCATR PAGNIAQIQP HSIFSLSTRI GDGPAIAISG AFAIARRLRK EPLLQLDEEE 
LEDVLLFTPY DGLEAFASLT HMNERLAQRA TEPDYRRRLG IEPAAEQASQ AASGFIALQW 
QYTLLEGNFL SLLHTRQIAR QQSMFAQAVQ LARAQRMDEV CFEQLITHLL KPELYFDNHW 
RLDRLDNDLV QSQMPDWWKT MQASQREEWL AQAQQFGESV VSIRQVSKAN FDPPDNDSRT 
YLTRYIDKHL DEVLKQASVE IAAQQITVSI NYRLGTEVLE IPGAPVLPTT ETENISLWQL 
AHTHAHRARA ADAVLIHAVD EAGAVIQKLD MATIKRLVTA IENPQHLSDY LDLNLKTSAY 
ARQLKQLQKA MLEAQMKMAL LEIEQQAFAP AGLEWIEAVL DSPAPQGRRT IKGEAIEVRF 
FSVNQFMMTN VMLIAPADKF ERGPLVLCTL DAADGVVFRW FNSMYHLTTG FLEKAPFQQY 
LIEQIPVSRR LETLRAMQYE KQAKHWRMPE VFTQLSLIPI PARLLHPVVF VSQSKDLYVE 
IHETRINQLI SEAKRQMSLA NGMGRSGRTF DLIANIGILF LPDPIMMPVA LGVGLYKTWS 
AFSKLDEGDL EGAAEEFLSA VGYLATAFIG RLALALKPAM HASKVVRRPH LIRRVGRDGQ 
IQIGYLLSHS RAPRFADPKL IVAMDSQRFI AIDIEGQTFF VSRRTNMFGH SRLYRRSPTD 
ATLLVHEQEY ALRTTSGAWK TVGKQIPRIS QSAIRNARSQ LASLTTAWPV SLEETGSAER 
LKFEADYLAL GAASNAENLS EIAAYAEGGS TDINPLLRSG VRNATTRNFL SQFYQLKAWD 
GTAFRSTYVS SEGMACLEHE AGAVFTDSGV QSASISRANA FLWSRDGFVS SNANAENHPV 
FFIFAPGIPK KNMFTGFLGD HVAVAPGTRM QLGATTRING QLFAWFDAPE QLTDQTFDLY 
TGAKELWV