Gene Psyr_4421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4421 
Symbol 
ID3369961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5286657 
End bp5287115 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content50% 
IMG OID637654781 
Producthypothetical protein 
Protein accessionYP_237489 
Protein GI66047648 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.268203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGA GATCACAATC ACATCGTTTA CGCTTGGGGC GATTCTCCGG TATCGGCCAG 
ATTTATTTAG TCACCGCAAA AACATTCCAG AGAAATCCTG TCTTTTCCGA TTGGCGCATG
GGGCGTCTGT TGGTGGATGA GCTTCGACAC GTTCAGGCGC AGCAACTGGC CGATTCATTA
GCCTGGGTTG TAATGCCCGA CCACATTCAC TGGCTACTGC AGTTGAATAG CCACTCATTA
TCCAGCGTTG TACAGCGCGT TAAATCGAAA AGCGCGATCG CCATCAACAG AGCCAGAGGC
TGCAGTGGAC CTTTTTGGCA AAGCGGATTC CACGACGTCA GCATCCGCAC TGAAGAAAGC
CTTTTGGATT TTGCCCGTTA TATCGTTGCC AATCCTGTTC GAGCCAACCT GGTCAAAAGC
GTACGCGATT ATCCCTTATG GGACGCAATT TGGCTGTGA
 
Protein sequence
MNQRSQSHRL RLGRFSGIGQ IYLVTAKTFQ RNPVFSDWRM GRLLVDELRH VQAQQLADSL 
AWVVMPDHIH WLLQLNSHSL SSVVQRVKSK SAIAINRARG CSGPFWQSGF HDVSIRTEES
LLDFARYIVA NPVRANLVKS VRDYPLWDAI WL