| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4419 |
|---|
| Symbol | cbiD |
|---|
| ID | 3369959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5283298 |
|---|
| End bp | 5284410 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637654779 |
|---|
| Product | cobalt-precorrin-6A synthase |
|---|
| Protein accession | YP_237487 |
|---|
| Protein GI | 66047646 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
|---|
| TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0560665 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGAGG AAACCGCCGA ACAACCTGCG CCACTGCGCA GTGGCCTGAC CACTGGCAGC
TGTGCGACCG CGACCAGCCT CGCGGCGGCG CGGTTGTTGC TCTGCGGGCA GGTCAGCGAC
GCGGTGGAGA TCGTCCTGCC CAAGGGTAAG CAGGTGCAGA TGCGTCTGGA ATTCTGCCGA
CTTGTGGATA ACTTCGCGGA AGCCGCCACC CTCAAGGATG CCGGCGACGA TCCGGATGTC
ACCCACGGCG CGCTGGTGTT TGCCCGCGTC AGGCTGCAAG CGGCAGCGGG CGTACGCTTC
TTGGCGGGCG CAGGTGTCGG CACCGTGACC CGCCCCGGGC TGGTGCTGGC AGTGGGTGAG
CCGGCCATCA ACCCGGTGCC CCGGCGCATG ATGACCGAGC ATTTGCTGCA ACTGGCCGAA
GAACAAGGCT ACAGCGGCGG ATTCGAAGTC ACGATCGGCG TCGAGGGCGG CGAGGCGCTG
GCGCTCAAGA CCATGAACCC GCGCCTGGGC ATTCTCGGCG GACTGTCGAT TCTCGGCACC
AGCGGGATTG TCCGGCCGTT CTCCTGCGCG GCTTATATCG CCTCGATCCA CCAGGGTATC
GATGTTGCTA CCACCAACGG CTATCGGCAT ATCGCCGCCT GCACCGGCAA TGCCAGCGAA
GACACCATGC GCCGCGTGTA CAAAATCCCC GATATCGCCC TGATCGAGAT GGGCGACTTC
GTCGGTGCCG TGCTCAAGCA CTTGCGCAGG GTGTCTGTGG ATAAGTTGAG CGTGTGCGGC
GGCTTCGGCA AGATCAGCAA GCTGGCCGCC GGCCATATGG ACCTGCACAG CCGCCATTCC
AGCATCGACC TGCCACAACT GGCGCGCTGG GCTGCGGATG TCGGCGCGGA TGCAGGCCTG
CAACAACAGA TCCTTGCAGC CAACACCAGT CAGCAAGCGC TGGCGATGAG CGCTGCGGCA
GGCGTGCCCC TCGGTGACGA AGTGTGTCGC CATGCGCTGA ATTTCGCGCG CAGCATCGTG
CCTGCGAGCG TTCAGGTGGA GGTTTTCGCA ATTGATCGTC AAGGCGGGCT GGTGGGTCAG
GCTGGCGTTG ACTCACAGAG AGAAATCACA TGA
|
|---|
| Protein sequence | MREETAEQPA PLRSGLTTGS CATATSLAAA RLLLCGQVSD AVEIVLPKGK QVQMRLEFCR
LVDNFAEAAT LKDAGDDPDV THGALVFARV RLQAAAGVRF LAGAGVGTVT RPGLVLAVGE
PAINPVPRRM MTEHLLQLAE EQGYSGGFEV TIGVEGGEAL ALKTMNPRLG ILGGLSILGT
SGIVRPFSCA AYIASIHQGI DVATTNGYRH IAACTGNASE DTMRRVYKIP DIALIEMGDF
VGAVLKHLRR VSVDKLSVCG GFGKISKLAA GHMDLHSRHS SIDLPQLARW AADVGADAGL
QQQILAANTS QQALAMSAAA GVPLGDEVCR HALNFARSIV PASVQVEVFA IDRQGGLVGQ
AGVDSQREIT
|
|---|
| |