| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4415 |
|---|
| Symbol | |
|---|
| ID | 3369955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5279267 |
|---|
| End bp | 5280001 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637654775 |
|---|
| Product | precorrin-2 C(20)-methyltransferase |
|---|
| Protein accession | YP_237483 |
|---|
| Protein GI | 66047642 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2243] Precorrin-2 methylase |
|---|
| TIGRFAM ID | [TIGR01467] precorrin-2 C20-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.407013 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGG CACGCGGTCG ATTGATTGGC CTGGGCGTCG GTCCCGGCGA CCCGGAGCTG
ATCACCGTCA AGGCCCTGCG CCTGCTGCGC GAGTCGCCGG TGGTGGCGTA TTTCGTGGCC
AAGGGTAAAA AGGGCAACGC CTTCGGCATC ATCGAAGCGC ATCTGCAGGA CGTTCAGACC
CTGATGCCGC TGGTCTACCC GGTCACCACC GAGGCATTGC CGGCGACACT GTCCTACGAA
AAGCTCATCA GCGACTTCTA CGACGAATCC AGCCGGCACA TTGCCGCGCA CCTGGACGCC
GGACGCGACG TGGCGGTGAT CTGCGAAGGC GATCCGTTTT TCTATGGCTC CTACATGTAC
CTGCACGATC GTCTGGCCGA GCACTATGAC GCTGAAGTGA TTCCGGGTGT GTGCTCGATG
CTCGGCGGTG CTTCGGTGCT CGGCGCACCG CTGGTGTATC GCAATCAGAG CCTGTCGGTG
CTGTCCGGTG TGCTGCCCCA CGATGACCTG AAACGCAAGC TGGCCGATGC CGACGCGGCG
GTGATCATGA AACTGGGGCG CAACTTCCAC AAGGTCCGCG AAGTGCTGAC CGAGCTGGGG
ATGGCCGGGC GTGCGCTGTA TGTCGAGCGC GCCACGATGA GCAACCAGAA AATCGTCCCG
CTGGATCAGG TCGACCCGAT GTCTTCGCCG TATTTTTCGC TGATTATCGT CCCGGGCGAC
AGGTGGCAAG GCTGA
|
|---|
| Protein sequence | MMQARGRLIG LGVGPGDPEL ITVKALRLLR ESPVVAYFVA KGKKGNAFGI IEAHLQDVQT
LMPLVYPVTT EALPATLSYE KLISDFYDES SRHIAAHLDA GRDVAVICEG DPFFYGSYMY
LHDRLAEHYD AEVIPGVCSM LGGASVLGAP LVYRNQSLSV LSGVLPHDDL KRKLADADAA
VIMKLGRNFH KVREVLTELG MAGRALYVER ATMSNQKIVP LDQVDPMSSP YFSLIIVPGD
RWQG
|
|---|
| |