Gene Psyr_4407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4407 
Symbol 
ID3369947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5269495 
End bp5270790 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content61% 
IMG OID637654767 
Productphosphoribosylamine--glycine ligase 
Protein accessionYP_237475 
Protein GI66047634 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0151] Phosphoribosylamine-glycine ligase 
TIGRFAM ID[TIGR00877] phosphoribosylamine--glycine ligase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.357121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATATTT TGATCATTGG CAGCGGCGGT CGTGAACACG CCCTGGCATG GAAAGTCGCC 
CAGGACCCGC GCGTGCAGAA GGTGTTTGTC GCACCGGGCA ATGCGGGCAC GGCGATCGAG
GCCAAATGCG AGAACGTGGC CATCGACGTT CTGGCACTGG AGCAACTGGC GGATTTCGCT
GAAAAGAACG TTGCGCTGAC CATCGTCGGC CCTGAAGTAC CGCTGGTTGC AGGCGTCGTC
GACCTGTTCC GCAGCCGTGG CCTGGACTGT TTCGGCCCGA CTGCCGGTGC TGCGCAGCTC
GAAGGTTCCA AGGCGTTCAC CAAGGACTTC CTGGCGCGCC ACAAGATTCC TACTGCCGAC
TATCAGAACT TCACCGAGAT CGAGCCTGCT CTGGCCTATC TGCGTGAAAA GGGCGCGCCG
ATTGTCATCA AGGCCGACGG CCTGGCCGCA GGCAAGGGCG TGATCGTCGC CATGACCCTG
GCAGAAGCCG AAGACGCCGT ACGTGACATG CTGGCTGGCA ACGCCTTTGG CGACGCCGGT
TCGCGCGTTG TCATCGAAGA GTTTCTCGAT GGCGAAGAAG CCAGTTTCAT TGTCATGGTC
GACGGCAAGA ATGTATTGCC CATGGCCACC AGCCAGGACC ACAAGCGCGT CGGCGACGGC
GACAGCGGGC CGAACACCGG CGGCATGGGT GCCTACTCCC CTGCCCCGGT GGTCACCGCC
GAGGTCCATC AACGTGTCAT GGACCTGGTT ATCTGGCCGA CCGTCAGGGG CATGGCCGAT
GAAGGCAACG TTTACACCGG CTTCCTCTAT GCTGGTCTGA TGATCGATAA AGCGGGTAAC
CCGAAAGTCA TCGAGTTCAA TTGCCGCTTC GGCGACCCGG AAACCCAGCC GGTCATGCTG
CGTCTGCAAT CGAGCCTGGT ACTGCTGGTC GAAGCTGCAC TGGCGCAGGC GCTGGACAAG
ATCGAAGCAC AGTGGGACCC GCGCCCGAGT CTGGGTATCG TGCTGGCCGC CGGGGGTTAT
CCTGGCGACT ACGCCAAAGG CGCGGTCATC GAAGGTCTGG ACGCAGCGGC ACAGCTCGAA
GGCAAGATCT TCCATGCAGG CACAGCCTTG CAGGATGAGC GTGTCGTGAC CAGCGGTGGT
CGTGTACTGT GTGCCACAGC ACTGGGTGAC AGCGTGGGCA ACGCGCAGGA AAATGCCTAC
GCGCTGGCCG CAAAAGTCGA CTGGCAAGGG TGTTTCTACC GCAAGGACAT TGGCTACCGA
GCCATTGCCC GTGAGCGTGG CGAAGACCAG GAATAA
 
Protein sequence
MNILIIGSGG REHALAWKVA QDPRVQKVFV APGNAGTAIE AKCENVAIDV LALEQLADFA 
EKNVALTIVG PEVPLVAGVV DLFRSRGLDC FGPTAGAAQL EGSKAFTKDF LARHKIPTAD
YQNFTEIEPA LAYLREKGAP IVIKADGLAA GKGVIVAMTL AEAEDAVRDM LAGNAFGDAG
SRVVIEEFLD GEEASFIVMV DGKNVLPMAT SQDHKRVGDG DSGPNTGGMG AYSPAPVVTA
EVHQRVMDLV IWPTVRGMAD EGNVYTGFLY AGLMIDKAGN PKVIEFNCRF GDPETQPVML
RLQSSLVLLV EAALAQALDK IEAQWDPRPS LGIVLAAGGY PGDYAKGAVI EGLDAAAQLE
GKIFHAGTAL QDERVVTSGG RVLCATALGD SVGNAQENAY ALAAKVDWQG CFYRKDIGYR
AIARERGEDQ E