Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4406 |
Symbol | purH |
ID | 3369946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5267706 |
End bp | 5269322 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637654766 |
Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
Protein accession | YP_237474 |
Protein GI | 66047633 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.283928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.403052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATCG AGATGACCGA CCAGACTACC CGCCTGCCGA TCCGCCGCGC TCTGATCAGC GTATCCGACA AGACAGGAAT CCTTGAGTTT GCCCGCGAGC TTGAAGCGCT GGGCGTCGAG ATTCTTTCCA CTGGCGGTAC GTTCAAGCTG CTCAAGGACA ACGGTGTCGC GGCAGTCGAA GTGGCCGACT ATACCGGCTT CGCTGAAATG ATGGACGGCC GGGTCAAGAC CCTGCACCCC ATGATCCATG GCGGGATTCT GGGTCGTCGC GGCATAGACG ACGCCATCAT GACCGAGCAC GGCATCAAGC CGATCGATCT GGTTGCGGTC AATCTGTACC CGTTTGAAGC CACTGTCTCC AAGCCGGGCT GCGACCTGCC CACCGCCATC GAAAACATCG ACATCGGCGG CCCGACCATG GTCCGCTCCG CGGCGAAGAA CCACAAGGAC GTCGCCATCG TGGTCAATGC CGGCGATTAC GGCCAGGTCC TGGAAAGCCT CAAGGCCGGT GGCCTGACCT ACGCCCAGCG CTTCGACCTG ATGCTCAAGG CGTTCGAGCA CACCGCCGCC TACGACGGCA TGATCGCCAA CTACCTGGGC GGCGTCGACC AGACCGCCGA AACCCTGAGT ACCGAAGGCC GCAGCCAGTT CCCGCGCACC TTCAACACCC AGTTCGTCAA GGCTCAGGAA ATGCGCTACG GCGAGAACCC GCACCAGAGT GCCGCGTTCT ACGTCGAAGC CAAACCTGCC GAGGTCGGCA TCGCCACCGC CACCCAGTTG CAAGGCAAGG AGCTGTCGTT CAACAACGTG GCCGATACCG ATGCCGCACT GGAATGCGTC AAGAGCTTCG TCAAACCGGC CTGCGTGATC GTCAAGCACG CCAACCCCTG CGGTGTGGCG GTCTGCCCGG ATGATGAAGG CGGCATTCGT CAGGCTTACG AACTGGCCTA CGCCACCGAT TCCGAGTCGG CATTTGGCGG CATCATCGCC TTCAACCGCG AGCTGGACGC TGCAACCGCC AAGGCCATCG TCGAGCGTCA GTTCGTCGAA GTGATCATCG CACCGAGCGT CAGCGCCGAA GCCCGCGCCA TCGTCGCCAG CAAAGCCAAC GTGCGCCTGC TGACCAGCGG CCAGTGGAGC GAGCGCCTGC CTGCGTGGGA CTACAAGCGT GTCAATGGCG GCCTGCTGGT ACAGAGCCGT GACATCGGCA TGATCACCGA AGCCGACCTC AAGGTCGTCA CCCGGCGTGC GCCGACCGAA CAGGAAATGC ATGACCTGAT CTTCGCCTGG AAAGTCGCCA AGTACGTCAA GTCCAACGCC ATCGTCTACG CCCGCAACCG CCAGACCGTC GGCGTCGGTG CAGGCCAGAT GAGCCGCGTG AACTCGGCAC GTATCGCTGC CATCAAGGCT GAACACGCCG GGCTGCAGGT TCAGGGCGCG GTCATGGCCT CCGATGCCTT CTTCCCGTTC CGTGACGGCA TCGACAACGC GGCCAAGGTC GGCATCACCG CTGTCATACA GCCAGGCGGC TCGATGCGTG ACAATGAAGT GATCGCTGCG GCCGACGAAG CCGGCATCGC GATGGTGTTT ACCGGCATGC GCCATTTCAG GCACTAA
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Protein sequence | MEIEMTDQTT RLPIRRALIS VSDKTGILEF ARELEALGVE ILSTGGTFKL LKDNGVAAVE VADYTGFAEM MDGRVKTLHP MIHGGILGRR GIDDAIMTEH GIKPIDLVAV NLYPFEATVS KPGCDLPTAI ENIDIGGPTM VRSAAKNHKD VAIVVNAGDY GQVLESLKAG GLTYAQRFDL MLKAFEHTAA YDGMIANYLG GVDQTAETLS TEGRSQFPRT FNTQFVKAQE MRYGENPHQS AAFYVEAKPA EVGIATATQL QGKELSFNNV ADTDAALECV KSFVKPACVI VKHANPCGVA VCPDDEGGIR QAYELAYATD SESAFGGIIA FNRELDAATA KAIVERQFVE VIIAPSVSAE ARAIVASKAN VRLLTSGQWS ERLPAWDYKR VNGGLLVQSR DIGMITEADL KVVTRRAPTE QEMHDLIFAW KVAKYVKSNA IVYARNRQTV GVGAGQMSRV NSARIAAIKA EHAGLQVQGA VMASDAFFPF RDGIDNAAKV GITAVIQPGG SMRDNEVIAA ADEAGIAMVF TGMRHFRH
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