Gene Psyr_4406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4406 
SymbolpurH 
ID3369946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5267706 
End bp5269322 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content63% 
IMG OID637654766 
Productbifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 
Protein accessionYP_237474 
Protein GI66047633 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 
TIGRFAM ID[TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.283928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.403052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCG AGATGACCGA CCAGACTACC CGCCTGCCGA TCCGCCGCGC TCTGATCAGC 
GTATCCGACA AGACAGGAAT CCTTGAGTTT GCCCGCGAGC TTGAAGCGCT GGGCGTCGAG
ATTCTTTCCA CTGGCGGTAC GTTCAAGCTG CTCAAGGACA ACGGTGTCGC GGCAGTCGAA
GTGGCCGACT ATACCGGCTT CGCTGAAATG ATGGACGGCC GGGTCAAGAC CCTGCACCCC
ATGATCCATG GCGGGATTCT GGGTCGTCGC GGCATAGACG ACGCCATCAT GACCGAGCAC
GGCATCAAGC CGATCGATCT GGTTGCGGTC AATCTGTACC CGTTTGAAGC CACTGTCTCC
AAGCCGGGCT GCGACCTGCC CACCGCCATC GAAAACATCG ACATCGGCGG CCCGACCATG
GTCCGCTCCG CGGCGAAGAA CCACAAGGAC GTCGCCATCG TGGTCAATGC CGGCGATTAC
GGCCAGGTCC TGGAAAGCCT CAAGGCCGGT GGCCTGACCT ACGCCCAGCG CTTCGACCTG
ATGCTCAAGG CGTTCGAGCA CACCGCCGCC TACGACGGCA TGATCGCCAA CTACCTGGGC
GGCGTCGACC AGACCGCCGA AACCCTGAGT ACCGAAGGCC GCAGCCAGTT CCCGCGCACC
TTCAACACCC AGTTCGTCAA GGCTCAGGAA ATGCGCTACG GCGAGAACCC GCACCAGAGT
GCCGCGTTCT ACGTCGAAGC CAAACCTGCC GAGGTCGGCA TCGCCACCGC CACCCAGTTG
CAAGGCAAGG AGCTGTCGTT CAACAACGTG GCCGATACCG ATGCCGCACT GGAATGCGTC
AAGAGCTTCG TCAAACCGGC CTGCGTGATC GTCAAGCACG CCAACCCCTG CGGTGTGGCG
GTCTGCCCGG ATGATGAAGG CGGCATTCGT CAGGCTTACG AACTGGCCTA CGCCACCGAT
TCCGAGTCGG CATTTGGCGG CATCATCGCC TTCAACCGCG AGCTGGACGC TGCAACCGCC
AAGGCCATCG TCGAGCGTCA GTTCGTCGAA GTGATCATCG CACCGAGCGT CAGCGCCGAA
GCCCGCGCCA TCGTCGCCAG CAAAGCCAAC GTGCGCCTGC TGACCAGCGG CCAGTGGAGC
GAGCGCCTGC CTGCGTGGGA CTACAAGCGT GTCAATGGCG GCCTGCTGGT ACAGAGCCGT
GACATCGGCA TGATCACCGA AGCCGACCTC AAGGTCGTCA CCCGGCGTGC GCCGACCGAA
CAGGAAATGC ATGACCTGAT CTTCGCCTGG AAAGTCGCCA AGTACGTCAA GTCCAACGCC
ATCGTCTACG CCCGCAACCG CCAGACCGTC GGCGTCGGTG CAGGCCAGAT GAGCCGCGTG
AACTCGGCAC GTATCGCTGC CATCAAGGCT GAACACGCCG GGCTGCAGGT TCAGGGCGCG
GTCATGGCCT CCGATGCCTT CTTCCCGTTC CGTGACGGCA TCGACAACGC GGCCAAGGTC
GGCATCACCG CTGTCATACA GCCAGGCGGC TCGATGCGTG ACAATGAAGT GATCGCTGCG
GCCGACGAAG CCGGCATCGC GATGGTGTTT ACCGGCATGC GCCATTTCAG GCACTAA
 
Protein sequence
MEIEMTDQTT RLPIRRALIS VSDKTGILEF ARELEALGVE ILSTGGTFKL LKDNGVAAVE 
VADYTGFAEM MDGRVKTLHP MIHGGILGRR GIDDAIMTEH GIKPIDLVAV NLYPFEATVS
KPGCDLPTAI ENIDIGGPTM VRSAAKNHKD VAIVVNAGDY GQVLESLKAG GLTYAQRFDL
MLKAFEHTAA YDGMIANYLG GVDQTAETLS TEGRSQFPRT FNTQFVKAQE MRYGENPHQS
AAFYVEAKPA EVGIATATQL QGKELSFNNV ADTDAALECV KSFVKPACVI VKHANPCGVA
VCPDDEGGIR QAYELAYATD SESAFGGIIA FNRELDAATA KAIVERQFVE VIIAPSVSAE
ARAIVASKAN VRLLTSGQWS ERLPAWDYKR VNGGLLVQSR DIGMITEADL KVVTRRAPTE
QEMHDLIFAW KVAKYVKSNA IVYARNRQTV GVGAGQMSRV NSARIAAIKA EHAGLQVQGA
VMASDAFFPF RDGIDNAAKV GITAVIQPGG SMRDNEVIAA ADEAGIAMVF TGMRHFRH