| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4403 |
|---|
| Symbol | |
|---|
| ID | 3369943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5264668 |
|---|
| End bp | 5265990 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637654763 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_237471 |
|---|
| Protein GI | 66047630 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA GTTTCGTCAC CCAGTGCCCG CACTGCCAGA CCAGTTTCAG AGTCAGTCAC
GCTCAACTGA GCGTGGCCCG TGGCGTGGTG CGTTGCGGAG CCTGCCTGCA GGTGTTCAAC
GCAGCACGGC AGTTGCTCGA GCAACGCGCC AGCGATGACG CCGAGAAAGA GGCCCTGCCC
GCCTCGCCGG TGGTCGCAGC CCTGCCCGAA CCGGAGTTTC TGCCGACGCC AGTTCCCGAG
CCCGAGCTGA AGCCTCAGCC GGAGCCGGAA AAGTTGCCCG AAGAGGACGA CCCCTGGCAG
GTCAGCGAAC TGGATCTGGA CAATCTCAAT CTGGACGAAG AACTGGCTCG CCTCGAACAA
CGCGAGACCC GCAGGCCTGA CACCTTTGCC CGCCCCGTCA GCGATATCGG CAACGACGAT
GTGAGCCTGA CTGCGAAGCG TGACAGTCGT CAGAGCGACG AAGCGGCATG GGTCGATACA
CTGCATAACG ATGATGTCGA GCAACTGCCC GAGCTGCATG CCGAGGTTAT CGCGGATACC
GACCCTGCAG AAGCTGCGGA GCCGCCGGAG GACGACAAAC GCACCGAGCC GTCGCTTTCA
CTGGACAACG ATCTGGACGA TGACGAGCCG CCGATGCCGG TCATCATTCA GCGCAAAGCC
CCGCCTGCCG AGAAGGTCGA GCGCTGGTCA GCGGTGGATG ACGATGATGA AGACCACGAC
CATGAGCCGG AGCCTGAAAC CCGGGGCAAG CGCAGCCGCA ACGAACCGGC AGTGCGCGAC
CAGACACTTC TTGATCTGAC CGACGATCCT TTACAGCTGG ACTGGCAACG GCCCAAACCA
CGCTGGGGCA GACGCCTGGC CTGGGGCCTG TTGATCGTAC TGGCGCTGAC GGGCCTGGCA
GGACAGTACG TCTGGTACCA CTTCGATCAG TTGGCACGCC AGGATCAGTA TCGCCCGTTG
TTTCAGCAGA TTTGCCCGCA GGTTGGCTGC AAGGTGCCGA GCAAGGTCGA CATTTCCCAG
CTCAAGAGCA GCAACCTGGT CGTGCGCAGC CACCCGGAGT TTCAGGGGGC GCTGGTGGTC
GATGCAATCA TCTACAACCG CGCCTCGTTT TCCCAGCCGT TTCCGCTGCT GGAGCTGCGC
TTTTCCGATA CCGGCGGTCA GTTGATTGCC AGTCGTCGGT TCAAGCCCAG CGAATACCTG
AGCGGCGAAA TGGCCGGCAA GGAAGAGATG CCACCCCAGA CGCCGATCCA TATCGCGCTG
GATATCCTTG ATCCTGGCGC CAAGGCCGTG AACTACAGCC TGAACTTCCG CTCGCCGGAA
TGA
|
|---|
| Protein sequence | MTDSFVTQCP HCQTSFRVSH AQLSVARGVV RCGACLQVFN AARQLLEQRA SDDAEKEALP
ASPVVAALPE PEFLPTPVPE PELKPQPEPE KLPEEDDPWQ VSELDLDNLN LDEELARLEQ
RETRRPDTFA RPVSDIGNDD VSLTAKRDSR QSDEAAWVDT LHNDDVEQLP ELHAEVIADT
DPAEAAEPPE DDKRTEPSLS LDNDLDDDEP PMPVIIQRKA PPAEKVERWS AVDDDDEDHD
HEPEPETRGK RSRNEPAVRD QTLLDLTDDP LQLDWQRPKP RWGRRLAWGL LIVLALTGLA
GQYVWYHFDQ LARQDQYRPL FQQICPQVGC KVPSKVDISQ LKSSNLVVRS HPEFQGALVV
DAIIYNRASF SQPFPLLELR FSDTGGQLIA SRRFKPSEYL SGEMAGKEEM PPQTPIHIAL
DILDPGAKAV NYSLNFRSPE
|
|---|
| |