| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4396 |
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| Symbol | |
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| ID | 3369936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5258246 |
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| End bp | 5258980 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637654756 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_237464 |
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| Protein GI | 66047623 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAG TGATCGTACT ACTCGGGCTG CTGTTGCTGG GCGGATGCGC CAGTGATGGT
CGCCCCCTCT GGACGCAGAC CACGGCTCAG GCGGGCCAGT GCCCCAAGCT GACCTCGGAT
CAGGAGTTCT CCCTGAATCT GGCTCAGAAC ATGGCCGACG AAGGCCGGCT GCATGCCAGC
CTTGCCAACC TGGAAAGCCT GCCCGACAGC CTGGGCGAAG TCCGCTTGCG CAAGGCCCGG
GTGTTGCGGC TATTAGGCAG CAACGAGGCA GAGCCTCTGT ACCGCAGCCT GCTGGGCACC
TGCCGGGCAG CCGAGGGTGA GCATGGCCTC GGGCAACTGG CTGCGGCGCG TGGTGACAAC
GCGCTGGCAC AGCAACACCT GCTGATGGCC AGCAAGCTGC AACCGACCGA TGAAAAGATC
CGTAATGACC TGGGCGTCGT CTACCTCAAT CAGCTGAAAC TGGAACAGGC ACGCTTTCAG
TTCCTGACGG CCATGGAGCT CAAACAATCG GACTCGCTGG CAGCGGTGAA CCTGGCCACG
CTGCTGATCT ATCAGAACAA CTGGACGCAG GCCGCCGAAC TGGCGTCGCG GGCCGGGCTG
ACGCCTGAAC AGGTGACCGA TGCCCAGGCG CGCGCCGAGC AATTGCGAAA GCCCCCTGCT
GCTCGAGCAT CTGCACGGCC CATTGCCAGC CTGACAGGAC AAAATGATCG TCAGTCCCAG
GAGGTACGAC CATGA
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| Protein sequence | MKPVIVLLGL LLLGGCASDG RPLWTQTTAQ AGQCPKLTSD QEFSLNLAQN MADEGRLHAS
LANLESLPDS LGEVRLRKAR VLRLLGSNEA EPLYRSLLGT CRAAEGEHGL GQLAAARGDN
ALAQQHLLMA SKLQPTDEKI RNDLGVVYLN QLKLEQARFQ FLTAMELKQS DSLAAVNLAT
LLIYQNNWTQ AAELASRAGL TPEQVTDAQA RAEQLRKPPA ARASARPIAS LTGQNDRQSQ
EVRP
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