| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4394 |
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| Symbol | |
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| ID | 3369934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5256440 |
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| End bp | 5257324 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637654754 |
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| Product | type II secretion system protein |
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| Protein accession | YP_237462 |
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| Protein GI | 66047621 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGT CTCTGGTACT GGGCCTGATC TCCTTGCTGC TGTTTATTGC GTCCATTCGC
ATGTTCTACC TGGCGCTCAA TCAGGGAGCC AGTGAACGGG TCCGGCAGCG GCTAATGGCC
GGGCAAGTGC AGCCCGTGGC TGAAAAGACC GGCTGGAGCT ACCTGGATCG GGCCTTTTTG
CGCGCCGGGC TGGGACAGCC GACCAAACGC ATGGGCCTGG CCTTGTCGCT GTATGCGCTG
CTGATACTGA TCGGCTACGC AATGGCCGGC GTCGTCGGTG CGCTCAGCGT GCTGCTGGCG
GTGCCTCTGA CACTGCGTGT GTTCGTGTCG TGGCGCTATG AGGTGCGCGT GCGCCGCATG
ATCCAGCAGC TGCCGCAATT GCTCGACCAT ACCGTGCGCA GCCTCAAGTC CGGCAGAACC
CTGGCCGACG CAGTGCTGCA CGGCATCGAC GCCACCGACC AGCCGCTCAA GGACGGCATG
AGCCGGATCG AGCGCAACGT ACAACTGGGG GTCAGTCTGC CGGATGCGGC AAGGGACTTT
GCAGAACTGT ATGAGCGCGA CGAATTTCAC CTGTTCGCCA TCGGCTTGCG GGTCAATCAC
CGCTACGGCG GCAATGCCAG CGAACTGATG GAAAACCTGA TCAAGCTGAT TCGTGATCGG
GAACAGGCCG GTCGCCAATT GCGCGCAATG ACCGGCGAAA CCCGAATGAC TGCCGTAGTG
CTGGCCCTGC TGCCGATCAG CATGGCCGGT TACTTTCTGG CGGTTAACCC CAGCTATCTG
CTGCATATGT GGGACGACGA AAGCGGCAAG ATCATGCTGA GCGTGGCCTT CGCCCTGCAG
GTCACGGGGT GCGTGGTGTT GTGGCGCATG TTGAGGAGCA TTTGA
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| Protein sequence | MSASLVLGLI SLLLFIASIR MFYLALNQGA SERVRQRLMA GQVQPVAEKT GWSYLDRAFL
RAGLGQPTKR MGLALSLYAL LILIGYAMAG VVGALSVLLA VPLTLRVFVS WRYEVRVRRM
IQQLPQLLDH TVRSLKSGRT LADAVLHGID ATDQPLKDGM SRIERNVQLG VSLPDAARDF
AELYERDEFH LFAIGLRVNH RYGGNASELM ENLIKLIRDR EQAGRQLRAM TGETRMTAVV
LALLPISMAG YFLAVNPSYL LHMWDDESGK IMLSVAFALQ VTGCVVLWRM LRSI
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