Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4394 |
Symbol | |
ID | 3369934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5256440 |
End bp | 5257324 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637654754 |
Product | type II secretion system protein |
Protein accession | YP_237462 |
Protein GI | 66047621 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCGT CTCTGGTACT GGGCCTGATC TCCTTGCTGC TGTTTATTGC GTCCATTCGC ATGTTCTACC TGGCGCTCAA TCAGGGAGCC AGTGAACGGG TCCGGCAGCG GCTAATGGCC GGGCAAGTGC AGCCCGTGGC TGAAAAGACC GGCTGGAGCT ACCTGGATCG GGCCTTTTTG CGCGCCGGGC TGGGACAGCC GACCAAACGC ATGGGCCTGG CCTTGTCGCT GTATGCGCTG CTGATACTGA TCGGCTACGC AATGGCCGGC GTCGTCGGTG CGCTCAGCGT GCTGCTGGCG GTGCCTCTGA CACTGCGTGT GTTCGTGTCG TGGCGCTATG AGGTGCGCGT GCGCCGCATG ATCCAGCAGC TGCCGCAATT GCTCGACCAT ACCGTGCGCA GCCTCAAGTC CGGCAGAACC CTGGCCGACG CAGTGCTGCA CGGCATCGAC GCCACCGACC AGCCGCTCAA GGACGGCATG AGCCGGATCG AGCGCAACGT ACAACTGGGG GTCAGTCTGC CGGATGCGGC AAGGGACTTT GCAGAACTGT ATGAGCGCGA CGAATTTCAC CTGTTCGCCA TCGGCTTGCG GGTCAATCAC CGCTACGGCG GCAATGCCAG CGAACTGATG GAAAACCTGA TCAAGCTGAT TCGTGATCGG GAACAGGCCG GTCGCCAATT GCGCGCAATG ACCGGCGAAA CCCGAATGAC TGCCGTAGTG CTGGCCCTGC TGCCGATCAG CATGGCCGGT TACTTTCTGG CGGTTAACCC CAGCTATCTG CTGCATATGT GGGACGACGA AAGCGGCAAG ATCATGCTGA GCGTGGCCTT CGCCCTGCAG GTCACGGGGT GCGTGGTGTT GTGGCGCATG TTGAGGAGCA TTTGA
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Protein sequence | MSASLVLGLI SLLLFIASIR MFYLALNQGA SERVRQRLMA GQVQPVAEKT GWSYLDRAFL RAGLGQPTKR MGLALSLYAL LILIGYAMAG VVGALSVLLA VPLTLRVFVS WRYEVRVRRM IQQLPQLLDH TVRSLKSGRT LADAVLHGID ATDQPLKDGM SRIERNVQLG VSLPDAARDF AELYERDEFH LFAIGLRVNH RYGGNASELM ENLIKLIRDR EQAGRQLRAM TGETRMTAVV LALLPISMAG YFLAVNPSYL LHMWDDESGK IMLSVAFALQ VTGCVVLWRM LRSI
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