| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4392 |
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| Symbol | |
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| ID | 3369932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5253975 |
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| End bp | 5255165 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637654752 |
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| Product | pilus assembly protein CpaE |
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| Protein accession | YP_237460 |
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| Protein GI | 66047619 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA GCCTGAGCCA GACCTTCCTG GCAATCACCC GTAACAATAC CGACCTGGAG
TGGCTGCAAA GTGCCCTGGG TTCGTTGGGC CAGGTGGTCA GTGCCGGTAC GGGCAGCCTC
GACGACCTGC TGGCGCTGGT GGACGTGACG TTCGCCAGCG TGGTGTTCGT CGGCCTGGAC
CGTGAGCATT TGATGACCCA GAGCGCCCTG ATCGAAAGTG CGCTGGAAGC CAAACCGATG
CTGGCCATCG TTGCGCTCGG CGATGGCATG GATAACCAGC TGGTGCTCAA TGCCATGCGC
GCAGGGGCAA GGGACTTCGT TGCCTATGGC TCTCGCTCCA GTGAGGTCGC CGGTCTGGTC
AGACGCCTGA GCAAGCGCCT GCCCGCCGTG ACGCCCAACC CGAACATGAG CGGCCTGTCG
GTGCTGTACG GCGTACAAAG CGATGACGAC GGGGCCTTGA TCGCGACGCA CCTGGCGATG
GTCGTGCACA AGAGCGGGCA GCGTACGCTG CTGCTGGACC TCGGCCTGCC ACGCGGCGAC
AGCCTGTTGA TGCTCGGTCT TGAGTCGACC TTCAGCTTCG GTGACGCCCT GCGCCACTTG
CGCAGGCTCG ATGCAACGCT GATCGACAGT GCTTTCACCA CCAGCGAAAG CGGCCTGCGC
ATTCTGGCTT ACAGCGAAGC CGACGATCAT CTGGAACAGT CCAGTGCCGC CGAGCTTTAT
ATGCTGCTCA GCGCGCTGCG CCAGCATTTT CAGCATGTGG TCGTGAACCT GGTAGGTCAG
CCGGACAGCG AAGCCTTGCG CTCGCTGGTC AGCCATTGCG ATCAGTTGTT GTGGTACACC
GACCAGAGCG TGCTGGGCTG TCGACGCAAC CTGACGGTGC TCAACAACTG GCGCGAAAAA
GGCATGAAAA TGCAACACGC CGGCCTGTTG GTTGATCGTT ATCAGCGCTC GGTCGCGCCC
AATTCCGAAA CCGTGAGCAA AACCTTCGGC CTGCCGGTGC TGGCGGTGCT GCCGCTTGCG
CCGGAGTTGC GCCTCAACGC CAAGAATCAG GGCGTGACGC TGTTCGAACT GGCGTCACGC
GACGCGCTGT GCTCCGGGCT GCGGCGGCTT GGCGAGCATC TGGCACGGCA TACCGAGGCT
CGCGAGAAAG CCGATCAGGG CTGGCTCGCT CGACTGTGGG GGAACCGGTA A
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| Protein sequence | MSQSLSQTFL AITRNNTDLE WLQSALGSLG QVVSAGTGSL DDLLALVDVT FASVVFVGLD
REHLMTQSAL IESALEAKPM LAIVALGDGM DNQLVLNAMR AGARDFVAYG SRSSEVAGLV
RRLSKRLPAV TPNPNMSGLS VLYGVQSDDD GALIATHLAM VVHKSGQRTL LLDLGLPRGD
SLLMLGLEST FSFGDALRHL RRLDATLIDS AFTTSESGLR ILAYSEADDH LEQSSAAELY
MLLSALRQHF QHVVVNLVGQ PDSEALRSLV SHCDQLLWYT DQSVLGCRRN LTVLNNWREK
GMKMQHAGLL VDRYQRSVAP NSETVSKTFG LPVLAVLPLA PELRLNAKNQ GVTLFELASR
DALCSGLRRL GEHLARHTEA REKADQGWLA RLWGNR
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