| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4384 |
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| Symbol | |
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| ID | 3369924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5241000 |
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| End bp | 5242340 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637654744 |
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| Product | multi anti extrusion protein MatE |
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| Protein accession | YP_237452 |
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| Protein GI | 66047611 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACGT TGCTCACTGA CTGGCGTCAT CGCTCAACCC ATCGTCGTGT CTGGGCGCTG
GCGACGCCGA TGATTCTGTC GAATATTTCC GTGCCGCTGG TGGCGCTGGT CGACAGTGCG
GTGATCGGTC ATTTACCCCA CGCCCATCAG TTGGGCGCCG TGGCGGTGGG CGCGACGCTG
TATACCTTTC TCGCCTGGGT CATGGGCTTT CTGCGCATGG GCACCACCGG GTTTGCCGCG
CAGGCGGCAG GGCGCAGTGA CAGCGCTGCG TTGCGGCGGA TTCTGTTGCA GGGGCTGCTG
CTGGCTGTCG GGCTGGCGTT GTTGCTGGGT GTGATCGCCT TGCCGTTCAG CCATCTGGCG
CTGACGATGA TGCAGCCGTC TGCCGATCTG CAGCAAATGA CCCTGGATTT CTTCCATACC
CGACTGTTCG GCCTGCCTGC GGCGCTGGCC AGTTATGCGC TGGTCGGCTG GTTTCTGGGT
GCGCAGAACG CTCGGGCGCC ACTGGCGATT CTGCTGGTGA CCAATGCCGT CAACATCGTG
CTCAATCTGT GGTTCGTCAT GGGGCTGGAC TGGGGCGTGG TCGGCTCGGC GCGTGCTTCG
GTACTCGCGG AGTGGACCGG CGTGGTGCTC GGTCTGCTGC TGGCACGCAA CACCTTGCGC
GCCTGGCCGG GCCGGATTGT CTGGTCGGCC TTGCGGCTGT GGAGCAACTG GCGGCCCTTA
CTGGCCGTCA ACCGGGACAT CTTTCTGCGC ACGCTGGCGC TGCAATCGGT GATGTTTCTG
ATCACCGTGC AGGGCGCTCG CCTGGGGGAT GCGACGGTTG CCGCCAATGC CTTGCTGCTC
AATGGCCTGC TGTTGACTGC CCATGCCCTG GATGGGCTGG CGCATGCGGT CGAAGCGCTG
TGCGGGCATG CCATCGGCGC GCGTGACCGG GATACGTTGC GCCGCTCTCT GGTGGTCGCG
GGGGGCTGGT CACTGATTTC CAGCGTAGTG TTTGCGCTGT TCTTTCTGGT GGCTGGGCAG
GGCTTCGTCA GCCTGCAGAC CGATATCCCG GAAGTGCGCG CCACCGCGAT GATGTATCTG
CCGTATCTGG CGCTGATGCC ATTGTTGGCC GTGTGGAGCT ACCTGCTGGA CGGCCTGTTC
ATCGGTGCCA CCCGTGCGCG GGAAATGCGT AACGCGATGC TGTTCAGCGC AGCGGGCATC
GCGCCATTGG CTTATCTGGC TTCCAGCCAC GGCAACCACG CCTTATGGCT GACGTTCCTG
GCTTTTACCC TGCTGCGCGG CCTGAGCCTG GGGACCATTG CCTGGCGGCT GACACGCAGG
GACGGCTGGT TCGTTCACTG A
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| Protein sequence | MSTLLTDWRH RSTHRRVWAL ATPMILSNIS VPLVALVDSA VIGHLPHAHQ LGAVAVGATL
YTFLAWVMGF LRMGTTGFAA QAAGRSDSAA LRRILLQGLL LAVGLALLLG VIALPFSHLA
LTMMQPSADL QQMTLDFFHT RLFGLPAALA SYALVGWFLG AQNARAPLAI LLVTNAVNIV
LNLWFVMGLD WGVVGSARAS VLAEWTGVVL GLLLARNTLR AWPGRIVWSA LRLWSNWRPL
LAVNRDIFLR TLALQSVMFL ITVQGARLGD ATVAANALLL NGLLLTAHAL DGLAHAVEAL
CGHAIGARDR DTLRRSLVVA GGWSLISSVV FALFFLVAGQ GFVSLQTDIP EVRATAMMYL
PYLALMPLLA VWSYLLDGLF IGATRAREMR NAMLFSAAGI APLAYLASSH GNHALWLTFL
AFTLLRGLSL GTIAWRLTRR DGWFVH
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