Gene Psyr_4380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4380 
Symbol 
ID3369920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5236285 
End bp5236656 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content61% 
IMG OID637654740 
Producttranslation initiation factor Sui1 
Protein accessionYP_237448 
Protein GI66047607 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.830208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAAAA AAGCCGCTTC TCTCGCCGCC CTGGGTGGCC TGGTATTTTC AACCGACGCT 
GGGCGCCACT GCCCCGATTG TCGTCAACCC GTTGCCGAGT GCACCTGCAA ACAGACGGCC
ATCCCCGAAG GTGACGGCAT TGCCCGTGTA CGCCGTGAAA GCAAGGGCCG GGGCGGCAAG
ACCGTCACCA CCATCAGCGG CGTCCCGCTG GCCGAAGAAC CGCTCAAAGA GTTGGCCAAG
GCTCTCAAGC AACGCTGCGG CACAGGCGGA TCGCTCAAGG AAGGCGTGAT CGAGATTCAG
GGCGATCACG TCGAACTGCT GTTGGCAGAG CTGATCAAAA AAGGCTTCAA GGCTAAAAAG
TCCGGCGGCT GA
 
Protein sequence
MAKKAASLAA LGGLVFSTDA GRHCPDCRQP VAECTCKQTA IPEGDGIARV RRESKGRGGK 
TVTTISGVPL AEEPLKELAK ALKQRCGTGG SLKEGVIEIQ GDHVELLLAE LIKKGFKAKK
SGG