Gene Psyr_4378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4378 
Symbol 
ID3369918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5234472 
End bp5235551 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content62% 
IMG OID637654738 
Producthypothetical protein 
Protein accessionYP_237446 
Protein GI66047605 
COG category[S] Function unknown 
COG ID[COG5345] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATT GGAAGAACCG CGCAGGCAGC GCGGGTGCGC GCAGCGCTGA CACTTCATCG 
ACCAAACGCC GCGGTTACCT GGGTAACCTG TTCTATAGCC GTGCGCTGGG CGCCCTGATC
TTGATCTACC TGCTCGTCGC ACTGGCAGTC GGCTGGTACT GGAGCAAGGA ACCTGCGCTG
TTCCCGGTAC AACAGAATGC GCAAGCCGCC GCCGAGCGCG AAGGCAAACA GATGGTCATC
GGCTACACGA CGGTTGAAAC GCTCAAGACC GTGGCGGGCA CGTTGCTTAA CAAGCCCGGT
GGATACCTGT CCAACGACCG CATGCCACCT GGCCTGTGGC TGGACAACAT CCCGAGCTGG
GAATACGGCG TGCTGGTGCA GGTGCGTGAT CTGAGTCGTG CGCTGCGCAA GGATTTCGCC
CGCTCCCAGT CGCAATCGGC TGAAGATGGC GATCTGGCCC GCGCCGAGCC GTTGTTCAAC
TTCAACAATC GCAGCTGGCT GCTGCCTTCC AGCGAGTCGC AGTACGCCGA GGGGATCAAC
TCCCTGAGCC GCTACCAGGC ACGCCTGTCC GATCCCAACC AGAAAGGCGC GCTGTTTTAT
GCCCGCGCCG ACAACCTGAA CAACTGGCTG GGCGATGTCG GCACCCGCCT GGGTTCGCTG
TCGCAACGCC TGTCGGCCAG CGTTGGCCGG GTCAAACTCA ACAGCACGCT GAAAACCGAA
GCCGCTGTGT CGGTCAAACC CGGTGAAGTA CCGCAGGTCG ACGAGGAAAT CGTCGAAACG
CCATGGCTGG AAATCGACAA CGTGTTCTAC GAAGCACGCG GTCAGGCCTG GGCGCTGTCG
CACCTGCTGC GCGCCATCGA GGTTGATTTT GCCGATGTAC TGGCGAAGAA GAACGCGACG
GTCAGCGTGC GCCAGATCAT TCGTGAGCTG GAAGCCTCGC AAGAGCCGAT GTGGAGCCCG
ATGATTCTCA ACGGCAGCCC GTTCGGCGTG TTCGCCAACC ACTCGCTGGT CATGGCCAAC
TACATCTCGC GTGCCAACGC TGCGGTCATC GACCTGCGCC AGCTGCTGAA TCAGGGCTGA
 
Protein sequence
MLDWKNRAGS AGARSADTSS TKRRGYLGNL FYSRALGALI LIYLLVALAV GWYWSKEPAL 
FPVQQNAQAA AEREGKQMVI GYTTVETLKT VAGTLLNKPG GYLSNDRMPP GLWLDNIPSW
EYGVLVQVRD LSRALRKDFA RSQSQSAEDG DLARAEPLFN FNNRSWLLPS SESQYAEGIN
SLSRYQARLS DPNQKGALFY ARADNLNNWL GDVGTRLGSL SQRLSASVGR VKLNSTLKTE
AAVSVKPGEV PQVDEEIVET PWLEIDNVFY EARGQAWALS HLLRAIEVDF ADVLAKKNAT
VSVRQIIREL EASQEPMWSP MILNGSPFGV FANHSLVMAN YISRANAAVI DLRQLLNQG