Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4361 |
Symbol | |
ID | 3369901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5213965 |
End bp | 5215152 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637654721 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_237429 |
Protein GI | 66047588 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0572554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCCCATTA GGATTCTCGA GAGACGGATG AACATCACCA CCTTTGCAAA ACGTTTGTGC CTGCTTGTTC CACTGATTAT CACCCCGACT GTGTGGGCGG CAGAGCAGAT GACGCCTGCT GCACCGCAAC TGGCGGCCAA GTCCTACGTG CTGATGGATG CCACCAGTGG CAACGTCCTG GTCGAGAACA ATGGTGATCA GCGTCTGGCT CCTGCCAGCC TGACCAAGCT GATGACCGCC TACATCGCGA CCCTGGAAAT CCGTCGCGGC CAGATCGGCG AAAACGATCC GGTGACGATC AGTGAAAACG CCTGGCGCAC AGGCGGTTCG CGGATGTTCA TCAAGGTCGG CAGCCAGGTC ACGGTCAGCG ACCTGTTGCA CGGCATCATC ATCCAGTCGG GTAACGACGC CAGTGTCGCG ATCTCCGAGC ACATCGCCGG CAGCGAAGAC GCCTTCGCCG ACATGATGAA CAAGACTGCC GGCGACCTGG GCATGACCAA CAGCCACTTC ATGAACCCGA CCGGTCTGCC GAACCCTGAG CACTACTCGT CGGCTCACGA CATGGCGATC CTGGCACGCG CGATCATTCA CGAGGACCCG GCCCACTATG CGATCTACTC GCAGAAGGAG TTCTTCTGGA ACGGCATCAA ACAGCCTAAC CGTAACCTGC TGCTGTGGCG CGACAAGACC GTTGACGGTC TGAAAACCGG TCACACCGAT GAAGCCGGCT ACTGCATGGT GTCCTCGGCA GTACGTGACG GCATGCGCCT GATCGCCGTG GTGTTCGGCA CCAACAGCGA ACAGGCCCGT GCGGCGGAAA CCCAGAAGCT GCTGACCTAT GGCTTCCGTT TCTTCGAAAC CCAGAACTTC TATCAGAAGG GCACCGAGCT GGCCCAGGCC ACGGTCTGGA AAGGCACCGA GCGTCAGGTC AAGGCCGGTC TGGCTGAAGA TCTGAGCATG ACCATGCCAA AAGGCGACAT GAAGAAGCTG TCTGCCAGCA TGACCATGAA CCCGCAACTG GTTGCGCCAA TCGCCAAGGG CGACGTGATC GGCAAGGTCG AGGTCAAGAA AGACGATCAG GTGGTTCACA CCGCCAATCT GATTGCGCTC GATGGGGTTG AGGAAGGTGG TATTTTCCGC CGCGTGTGGG ATAGCATCCG CCTGTTCTTC TACGGCTTGT TCAACTGA
|
Protein sequence | MPIRILERRM NITTFAKRLC LLVPLIITPT VWAAEQMTPA APQLAAKSYV LMDATSGNVL VENNGDQRLA PASLTKLMTA YIATLEIRRG QIGENDPVTI SENAWRTGGS RMFIKVGSQV TVSDLLHGII IQSGNDASVA ISEHIAGSED AFADMMNKTA GDLGMTNSHF MNPTGLPNPE HYSSAHDMAI LARAIIHEDP AHYAIYSQKE FFWNGIKQPN RNLLLWRDKT VDGLKTGHTD EAGYCMVSSA VRDGMRLIAV VFGTNSEQAR AAETQKLLTY GFRFFETQNF YQKGTELAQA TVWKGTERQV KAGLAEDLSM TMPKGDMKKL SASMTMNPQL VAPIAKGDVI GKVEVKKDDQ VVHTANLIAL DGVEEGGIFR RVWDSIRLFF YGLFN
|
| |