| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4354 |
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| Symbol | holA |
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| ID | 3369894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5208672 |
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| End bp | 5209709 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637654714 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_237422 |
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| Protein GI | 66047581 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG CCCCCGCCCA ACTCGGCAAG CACTTGCAAG GCACACTGGC GCCCGTCTAT
GTGATCAGCG GTGACGATCC GCTGCTCTGC CAGGAAGCAG CTGACGCCAT TCGCGCAGCC
GCACGCCAGC AAGGCTTCGA TGAGCGGCAG GTATTCAGCG CCGACGCCAG CTTCGACTGG
GGCACATTGC TCCAGGCGGG TGCCAGCATG TCGCTGTTTG CCGAACGCCG TCTCCTGGAG
TTACGTCTGC CCTCCGGCAA GCCCGGCGAC AAGGGTGCTG CGGCACTCAT GGAATACTGC
GCCAGACCTG CCGAAGACAC CCTGCTGCTG ATCAGCCTGC CCAAGCTCGA TGGCAGTGCG
CAGAAAACCA AATGGGGCAA GGCCCTGGTC GAGGGCGCGC AAACCCAGTT CGTGCAAATC
TGGCCGGTGG ACATCGGCCA GCTGCCGCAA TGGATTCGCC AGCGCCTGTC GCAGGCAGGT
CTGGCAGCCA CTCAGGACGC TGTCGAACTG ATCGCTGCCC GGGTCGAAGG CAACCTGTTG
GCCGCCGCGC AGGAAATCGA AAAGCTCAAA TTGATGGCCG AAGAAGGCCA GATCACCGTC
GAGACCGTGC AGGCGGCCGT AGCCGACAGT GCGCGCTTCG ACGTATTTGG CCTGACCGAT
GCAGTGCTCA ATGGCGAAGC TGCCCACGCG CTGCGCATGC TCGAAGGACT GCGTGGCGAA
GGGGTCGAAA CGCCGGTGAT TCTCTGGGCA TTGACCCGCG AACTGCGCGC CCTGGCCAAC
ATGTCGCAAC AGTTCAGCCA GGGCGTACCG CTGGACAAGG TGTTCAGCTC GGCACGCCCG
CCGATCTGGG ACAAGCGCAA GCCACTGATG AGCAAAGCCC TGCAACGTCA CTCGGCCAAA
CGCTGGAGCC AGCTGCTCAT GGATGCGCAA CGCGTCGATG CGCAGATCAA AGGCCAGGCA
GCAGGCTCGC CCTGGAGCAG CCTGAGCCGG CTGGCACTGC TGATGGCGGG GCAACGATTG
GCATTGCCTG CGGAGTAG
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| Protein sequence | MKLAPAQLGK HLQGTLAPVY VISGDDPLLC QEAADAIRAA ARQQGFDERQ VFSADASFDW
GTLLQAGASM SLFAERRLLE LRLPSGKPGD KGAAALMEYC ARPAEDTLLL ISLPKLDGSA
QKTKWGKALV EGAQTQFVQI WPVDIGQLPQ WIRQRLSQAG LAATQDAVEL IAARVEGNLL
AAAQEIEKLK LMAEEGQITV ETVQAAVADS ARFDVFGLTD AVLNGEAAHA LRMLEGLRGE
GVETPVILWA LTRELRALAN MSQQFSQGVP LDKVFSSARP PIWDKRKPLM SKALQRHSAK
RWSQLLMDAQ RVDAQIKGQA AGSPWSSLSR LALLMAGQRL ALPAE
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