Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4334 |
Symbol | |
ID | 3369874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5185538 |
End bp | 5186704 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637654694 |
Product | hypothetical protein |
Protein accession | YP_237402 |
Protein GI | 66047561 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.966043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCTG GCATCTGGCA GTTTGCGGGT GTAAGTCTGT TGTGTCTGAG CATCGGTGCT CAGGCGCTGG CCGACGAACG TGATGAACCA CCGCGCAATC CGCTTTACGG CAGCCCTGGT GAAAACGCGC AGCAGCGTCA GCAGCAACAG CAGCGTGCTC AAGAGCAGAA CAACCAGCAG CGGCAGATCC AACAGCAGCA AAACCAGCTG CGCCAGGTCG AGCGTCAGCA GCAACAGCAG ATCAACCAGC AGCAGACCAA TCAGCAACGC CAGATTCAGG AGCAGCAGAA TCAGCAGCGT CAGGTCGAGC GTCAGCAACA GCAGCAGATC CAGCAACAGC AGCTTCAGCA GCGCAACATC GAACGCCAGC AGCAACAGCA GATCGAGCAG CAACAGCGCG ATCAGCAGCG CCAGATTCAG CAGCAGCAAA ACCAGCAGCG TCAGCAGTTG CGCCAGGCTC AGGACAACCT GCCGATCCAG AGCGGCCCGA AAGAGGCTTG GCAAACCCAG CCGCCGCGGC AGGGCTATTA CCAAGACATT CCACGCGGCA ACAACCGCAA CTGGCAGGCC GGCAACGGTC GCCCGAATGA CCGTTGGGAA GGGCGTCCCG ACGGGCACGG CAATGGCTGG GGGCCAGGTC CGCAATATCG GCCTGGCTAT GCGATAGATC GCGTACCGGG TGGCTACTCG CGTATTCCCT ATCGTGGTCA GGACTATTAC TACTCGGGTG GCTACTGGTA TCGCCCGCAA GGCCCGCGTT ATGTCGTGGT GACACCGCCC TACGGCGTGC GTGTCAGCAG ACTACCGTCC TACTCTCAGG AAGTATGGAT CGGCAGCAGC CTGCTGTTTC TGGCTGCCGG GACCTATTAC GCCTACCAGC CGGACAGCCA GGACTACGTG GTGGTCAATC CGCCGCAGAA CGAAGCCGTG TATCAGGCTC CGCCGGCCGA ACAACAGGGC AATGGCTACG ATCCGGTGGC CTACCCTGCC AACGGGCAGA GCCCGCAGCA GGTCGAGCTG GATAAATACC AGTGCTACCG CTGGGCTGCG GAGCAAAGCG GTTTCGACCC GGCCAATGTC ACCAGCCAGC CACCGCCTGA CGTGGTCGAT CTGTATCGTC GCTCAATGGG CGCGTGCCTG GCGGGGCGGG GCTACACCGT CAACTGA
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Protein sequence | MKSGIWQFAG VSLLCLSIGA QALADERDEP PRNPLYGSPG ENAQQRQQQQ QRAQEQNNQQ RQIQQQQNQL RQVERQQQQQ INQQQTNQQR QIQEQQNQQR QVERQQQQQI QQQQLQQRNI ERQQQQQIEQ QQRDQQRQIQ QQQNQQRQQL RQAQDNLPIQ SGPKEAWQTQ PPRQGYYQDI PRGNNRNWQA GNGRPNDRWE GRPDGHGNGW GPGPQYRPGY AIDRVPGGYS RIPYRGQDYY YSGGYWYRPQ GPRYVVVTPP YGVRVSRLPS YSQEVWIGSS LLFLAAGTYY AYQPDSQDYV VVNPPQNEAV YQAPPAEQQG NGYDPVAYPA NGQSPQQVEL DKYQCYRWAA EQSGFDPANV TSQPPPDVVD LYRRSMGACL AGRGYTVN
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