Gene Psyr_4334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4334 
Symbol 
ID3369874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5185538 
End bp5186704 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content61% 
IMG OID637654694 
Producthypothetical protein 
Protein accessionYP_237402 
Protein GI66047561 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.966043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTG GCATCTGGCA GTTTGCGGGT GTAAGTCTGT TGTGTCTGAG CATCGGTGCT 
CAGGCGCTGG CCGACGAACG TGATGAACCA CCGCGCAATC CGCTTTACGG CAGCCCTGGT
GAAAACGCGC AGCAGCGTCA GCAGCAACAG CAGCGTGCTC AAGAGCAGAA CAACCAGCAG
CGGCAGATCC AACAGCAGCA AAACCAGCTG CGCCAGGTCG AGCGTCAGCA GCAACAGCAG
ATCAACCAGC AGCAGACCAA TCAGCAACGC CAGATTCAGG AGCAGCAGAA TCAGCAGCGT
CAGGTCGAGC GTCAGCAACA GCAGCAGATC CAGCAACAGC AGCTTCAGCA GCGCAACATC
GAACGCCAGC AGCAACAGCA GATCGAGCAG CAACAGCGCG ATCAGCAGCG CCAGATTCAG
CAGCAGCAAA ACCAGCAGCG TCAGCAGTTG CGCCAGGCTC AGGACAACCT GCCGATCCAG
AGCGGCCCGA AAGAGGCTTG GCAAACCCAG CCGCCGCGGC AGGGCTATTA CCAAGACATT
CCACGCGGCA ACAACCGCAA CTGGCAGGCC GGCAACGGTC GCCCGAATGA CCGTTGGGAA
GGGCGTCCCG ACGGGCACGG CAATGGCTGG GGGCCAGGTC CGCAATATCG GCCTGGCTAT
GCGATAGATC GCGTACCGGG TGGCTACTCG CGTATTCCCT ATCGTGGTCA GGACTATTAC
TACTCGGGTG GCTACTGGTA TCGCCCGCAA GGCCCGCGTT ATGTCGTGGT GACACCGCCC
TACGGCGTGC GTGTCAGCAG ACTACCGTCC TACTCTCAGG AAGTATGGAT CGGCAGCAGC
CTGCTGTTTC TGGCTGCCGG GACCTATTAC GCCTACCAGC CGGACAGCCA GGACTACGTG
GTGGTCAATC CGCCGCAGAA CGAAGCCGTG TATCAGGCTC CGCCGGCCGA ACAACAGGGC
AATGGCTACG ATCCGGTGGC CTACCCTGCC AACGGGCAGA GCCCGCAGCA GGTCGAGCTG
GATAAATACC AGTGCTACCG CTGGGCTGCG GAGCAAAGCG GTTTCGACCC GGCCAATGTC
ACCAGCCAGC CACCGCCTGA CGTGGTCGAT CTGTATCGTC GCTCAATGGG CGCGTGCCTG
GCGGGGCGGG GCTACACCGT CAACTGA
 
Protein sequence
MKSGIWQFAG VSLLCLSIGA QALADERDEP PRNPLYGSPG ENAQQRQQQQ QRAQEQNNQQ 
RQIQQQQNQL RQVERQQQQQ INQQQTNQQR QIQEQQNQQR QVERQQQQQI QQQQLQQRNI
ERQQQQQIEQ QQRDQQRQIQ QQQNQQRQQL RQAQDNLPIQ SGPKEAWQTQ PPRQGYYQDI
PRGNNRNWQA GNGRPNDRWE GRPDGHGNGW GPGPQYRPGY AIDRVPGGYS RIPYRGQDYY
YSGGYWYRPQ GPRYVVVTPP YGVRVSRLPS YSQEVWIGSS LLFLAAGTYY AYQPDSQDYV
VVNPPQNEAV YQAPPAEQQG NGYDPVAYPA NGQSPQQVEL DKYQCYRWAA EQSGFDPANV
TSQPPPDVVD LYRRSMGACL AGRGYTVN