Gene Psyr_4310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4310 
Symbol 
ID3369850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5136129 
End bp5137064 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content48% 
IMG OID637654670 
Producthypothetical protein 
Protein accessionYP_237378 
Protein GI66047537 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0944939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCAGGGA ATGCCGGTAT GTCCAATCTG TTTATTTCTA ACGTCGTGTT TGATTTCGGC 
GAGTCGAAGT CAATTGATAG CTTGTCATCT TGCATGAGTC CTGATGAGCT TAAGGCCTTT
CGGGCGGGCG GCTTTGAATA TTATGTAAAT GAAAGTCGTG ACGTTTATGC TGTGTGCGAA
AAGGTAGCCG CGAAGGTCCT GGATGAGAGC CATGTCGGTC GAGAGGATGT GACCGATATT
GTCTATATCA GCTCAACCAA ATTCATTGAC AAGGTCGTTG GCCTGAGTGT CTACCTCTCG
AAGTTGGCAG CGAATATCGG TATTCATAAG GCGACGCTGT ATGCCTTGTC TGCGGGGGAG
TGCGGTAATT TCGTTCATGC CTTGCGTTTT TGTGGGCAGA TCCTGCAGGA GCGTCCAGAC
AGTAAGGTTT TGTTGGTATT CGCAGAAAAG CTGATGACTG ACGAGGAGCG GCATTATCCT
GGAACGGCGA TTTTAAGTGA CGGGGTGGCA GTTTGTCTGG TGACCTGCGA AAAAACCGGA
AACTGCTACG AGGTTATCGC GCGGTCGGAG GCCACCGACC ACCGAGTCAC TAAGGCTTAT
GCTGAACAGA AAACTATTGA TGCGTTGCGG CTCGCCTTGA CCGCAATTCA TACGCTGTCT
AGGGATATTT TTTTGAAAGT TGATTTTGAT AAAAGTGCTA TAAACCACTT CATAACCAAT
AACTTTATTA TGCACTTGTC CAAAATGTAC ATTATGGAGG TCGGCGGCGA CGCCTCAAAA
CTCAGGCTGC CAACGCGGCC TCCGAAAGCG CATGTTTTTA CGATTGATTG TTTGTTGAAT
CTGACTGGGA CCCCGATGGA TGATGGTGAT TTGGCCTTTT GCCTGAGTTT TGGCATGTTT
TTTTGGGGGG CATGCATCGT TAAGTACCAT GCCTGA
 
Protein sequence
MPGNAGMSNL FISNVVFDFG ESKSIDSLSS CMSPDELKAF RAGGFEYYVN ESRDVYAVCE 
KVAAKVLDES HVGREDVTDI VYISSTKFID KVVGLSVYLS KLAANIGIHK ATLYALSAGE
CGNFVHALRF CGQILQERPD SKVLLVFAEK LMTDEERHYP GTAILSDGVA VCLVTCEKTG
NCYEVIARSE ATDHRVTKAY AEQKTIDALR LALTAIHTLS RDIFLKVDFD KSAINHFITN
NFIMHLSKMY IMEVGGDASK LRLPTRPPKA HVFTIDCLLN LTGTPMDDGD LAFCLSFGMF
FWGACIVKYH A