Gene Psyr_4302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4302 
Symbol 
ID3369842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5128171 
End bp5128875 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content62% 
IMG OID637654662 
Producthypothetical protein 
Protein accessionYP_237370 
Protein GI66047529 
COG category[S] Function unknown 
COG ID[COG3416] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.216164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.509055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCG AAGAGCAAAC CCTGATTGAC GGTCTTTTCT CGAAACTGAA AGACGCTGAA 
ACGGCTTCCG CCCCGCGAGA TGCTGCGGCC GAGGCGCGTA TCAAGGAGCA TCTGACCCGC
CAGCCCGCTG CGCCGTACTA CATGACGCAG GCGATTCTGG TGCAGGAAGC GGCCGTCAAT
CAGCTCAATC AGCAGGTAAA ACAGCGCGAC GAGCAGATTC AGCAGTTGCA GGCCGAGCTC
CAGCAGGCCA AGGGGCAAGC CTCGTCCGCG CCAGCGAGTG GCGGGTTTTT GTCGAGTATC
TTTGGCAGCA GTGCACCGCG CGCATCGCAG CCACAACCGA GCCAGCCATC CAGTGGCGGC
TGGCGTGATG GTGGCGGTTT CAATCCTGCA CCTGCGCCCG CAGCGCCGCA GGGCGGTTAT
GCCGCGCCTG CTCCGGCTGC CGGTAGTGGC TTTCTTGGCG GGGCGCTGAA GACCGCGGCC
GGTGTCGCGG GCGGTGTGCT GCTGGCAGAA GGTATCAGCA GCATGTTCAG CCACCACAGC
CAGCCGCAGG AAATCGTCGA AGTCATTCAT GACGCGCCAC AGGCGCAGGA CACCGGCTCG
TTCAATGATC AGGGCGGTTG GGGGCAGCCG GATCAGCAGT ACACGGCTGA CGACAATTTC
GACGATGGTG GCGACATGTT CTCGGATGAT GATTCGTTCG TTTGA
 
Protein sequence
MNSEEQTLID GLFSKLKDAE TASAPRDAAA EARIKEHLTR QPAAPYYMTQ AILVQEAAVN 
QLNQQVKQRD EQIQQLQAEL QQAKGQASSA PASGGFLSSI FGSSAPRASQ PQPSQPSSGG
WRDGGGFNPA PAPAAPQGGY AAPAPAAGSG FLGGALKTAA GVAGGVLLAE GISSMFSHHS
QPQEIVEVIH DAPQAQDTGS FNDQGGWGQP DQQYTADDNF DDGGDMFSDD DSFV