Gene Psyr_4299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4299 
Symbol 
ID3369839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5126309 
End bp5126776 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content58% 
IMG OID637654659 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_237367 
Protein GI66047526 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0440878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.493951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGG ATAAATACGA TCGGATTCTG CTCGATGAGC TGCTGAAAAA TGGCCGGGCG 
TCTTTTGCGC AGCTGGCGAA ACTGGTCAAC CTGTCCGCGC CCGCGGTGGC CGAGCGGGTC
GCCAAGCTAG AGGCCAGTGG CGTGATTACC GGTTACGAAG CGAAGGTCGA CCTGGCGAAA
GTCGGGCTGC CGATTCAATG CATCATCGAA CTGCGCATGG GCAGCCATGG CAATCAGCAG
GCCTACAAGG AACTGTGGAA AGTCCCCGAG CTGATCCAGT GTTACCGGGT GACGGGCGAC
CCGTGCGTAA TCATGCGCGC AGCGGTCGAT TCGATGCCGC ATCTGGAAGA CCTGATCAAC
CGGATCGCCA AGTTTGGCTT CAGCAAGACA TCAATCGTGC TGTCGACAGC CGTGGAGCGC
AGCCTGCCGA GCGATTACTT GATCAGCAAC GGCAAGCAGG AGCACTGA
 
Protein sequence
MILDKYDRIL LDELLKNGRA SFAQLAKLVN LSAPAVAERV AKLEASGVIT GYEAKVDLAK 
VGLPIQCIIE LRMGSHGNQQ AYKELWKVPE LIQCYRVTGD PCVIMRAAVD SMPHLEDLIN
RIAKFGFSKT SIVLSTAVER SLPSDYLISN GKQEH