Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4299 |
Symbol | |
ID | 3369839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5126309 |
End bp | 5126776 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637654659 |
Product | helix-turn-helix, Fis-type |
Protein accession | YP_237367 |
Protein GI | 66047526 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0440878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.493951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCTGG ATAAATACGA TCGGATTCTG CTCGATGAGC TGCTGAAAAA TGGCCGGGCG TCTTTTGCGC AGCTGGCGAA ACTGGTCAAC CTGTCCGCGC CCGCGGTGGC CGAGCGGGTC GCCAAGCTAG AGGCCAGTGG CGTGATTACC GGTTACGAAG CGAAGGTCGA CCTGGCGAAA GTCGGGCTGC CGATTCAATG CATCATCGAA CTGCGCATGG GCAGCCATGG CAATCAGCAG GCCTACAAGG AACTGTGGAA AGTCCCCGAG CTGATCCAGT GTTACCGGGT GACGGGCGAC CCGTGCGTAA TCATGCGCGC AGCGGTCGAT TCGATGCCGC ATCTGGAAGA CCTGATCAAC CGGATCGCCA AGTTTGGCTT CAGCAAGACA TCAATCGTGC TGTCGACAGC CGTGGAGCGC AGCCTGCCGA GCGATTACTT GATCAGCAAC GGCAAGCAGG AGCACTGA
|
Protein sequence | MILDKYDRIL LDELLKNGRA SFAQLAKLVN LSAPAVAERV AKLEASGVIT GYEAKVDLAK VGLPIQCIIE LRMGSHGNQQ AYKELWKVPE LIQCYRVTGD PCVIMRAAVD SMPHLEDLIN RIAKFGFSKT SIVLSTAVER SLPSDYLISN GKQEH
|
| |