Gene Psyr_4289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4289 
Symbol 
ID3369829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5115850 
End bp5116740 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content61% 
IMG OID637654649 
Producthypothetical protein 
Protein accessionYP_237357 
Protein GI66047516 
COG category[R] General function prediction only 
COG ID[COG2321] Predicted metalloprotease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTGGA AAAAAGGCCG ACGCAGCGAC AACGTAGTCG ATGCGCGCGA TGGCGGCAGC 
AGTGGTGGCG GCGGTGGCAT GCGCATCGGC GGCAAGGGGC TGGGTCTGGG CGGCATCGTG
ATCATCGTCG CCATCGGCCT GCTGACCGGC CAGGACCCGA TGCAGATTCT CGGACAACTG
ACCGGACAAG TGACCGAGCA AAGCGCCCCA CCCAGCGCGC AAACGCGTGA GGCCCCACCG
GCCAACGACC AGCAGGCCGA ATTCGTGCGC AGCATCCTTG GCGATACCGA GGACACCTGG
CGTGCCGTGT TCGCCCAGAA CGGTCGCGAA TACAAGGACC CCACGCTGGT GTTGTTCAGC
GGCCAGGTGA ACTCGGCCTG CGGTCGCGCT ACGTCGGCAA CCGGTCCGTT CTATTGCCCG
GCTGACCAGC AGGTCTATCT GGACATGGAG TTCTTCCGTG AAATGGCCCA GCGCTTTTCC
GCCGCTGGCG ACTTCGCCCA GGCTTACGTG ATCGCCCATG AAGTCGGGCA CCATGTGCAG
ACCCTGCTGG GCATTTCCGC CAAGGTCGAC AAGGCTCGCC AGGCCGGGCA AAAAATGGAA
GGAGCCAACG GTTTACTGGT CCGCCAGGAG CTGCAAGCGG ACTGCTTTGC CGGTGTTTGG
GCGTACAACG CACAAAATCG TTTGAACTGG CTCGAGCCGG GTGATATTGA AGAAGCATTG
AACGCGGCCA ACGCTATCGG CGATGATCGC TTGCAACAGC AAAGCAGTGG TCGAGTCGCT
CCGGACTCCT TCACTCACGG CACGTCTGCA CAGCGTGTAC GCTGGTTCAA GGCAGGCTTT
GCCCAAGGTC AAATCAATCA ATGCGATACA TTCGCCGCCA AGAGTCTCTG A
 
Protein sequence
MLWKKGRRSD NVVDARDGGS SGGGGGMRIG GKGLGLGGIV IIVAIGLLTG QDPMQILGQL 
TGQVTEQSAP PSAQTREAPP ANDQQAEFVR SILGDTEDTW RAVFAQNGRE YKDPTLVLFS
GQVNSACGRA TSATGPFYCP ADQQVYLDME FFREMAQRFS AAGDFAQAYV IAHEVGHHVQ
TLLGISAKVD KARQAGQKME GANGLLVRQE LQADCFAGVW AYNAQNRLNW LEPGDIEEAL
NAANAIGDDR LQQQSSGRVA PDSFTHGTSA QRVRWFKAGF AQGQINQCDT FAAKSL