Gene Psyr_4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4279 
Symbol 
ID3369819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5103190 
End bp5104314 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content64% 
IMG OID637654639 
ProductrRNA (guanine-N(2)-)-methyltransferase 
Protein accessionYP_237347 
Protein GI66047506 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGC TCATCAGTCC CTTCGCTGAA CTTGATCTCA TTCGCCAACC CGAGCAACAG 
GATGAGCCCC TGCAGGCATT CGATGCCGCC GACGAGTACC TGCTCAATCA TGTTGCACAG
GCAGGGCTCA GCCTGCCCAG CCGGGTTCTG GTGCTCAATG ACAGTTTCGG CGCGCTGGCG
GCGAGTCTCG CGCCGCATGC CACGGTGATC AGCAGTACCG ACTCGTTTCT GGCGGCGCAG
GCGCTGGAAA AGAATCTGGC GCGCAACGGC ATGAGCTACG ACGCAGTACC GCACATCCCG
GCCAGCGAAG CGTTGCAGGG GCCCTTCGAC TGGGTGCTGA TCCGGGTGCC CAAGACCCTG
GCGCTGCTGG AAGAGCAACT GATACGCCTG CAAGGCCAGC TGGCCCCCGG CGCTCGGGTC
ATTGCTGCGG CAATGGTCAA GCATTTGCCG CGTTCGGCGG GCGACTTGCT GGAGGAATAT
GTAGGGCCGG TGCAGGCCTC GCTGGCAGTG AAAAAAGCCA GGCTGCTGTT CGCCACGCCA
CAGCCCATGG AAGTGCGCAC CTCGCCCTAT CCGACGCGCT ACCGGCTGGA GGAGCCGGCC
ATCGAACTGC TCAACCATGC CAATGTGTTT TGCCGCGACG GGCTGGACAT CGGCACTCGC
GCCTTCCTGC CGCATCTGCC GAAAAACCTT GGCACGGCAA GGGTCGCAGA CCTGGGTTGC
GGCAACGGCG TACTGGCCAT TGCCAGCGCG CTGGACAACC CGCAAGCGCA CTACACGCTG
GTCGACGAGT CGTTCATGGC CGTGAAATCG GCAGCCGAGA ACTGGCGCGC GACGCTGGGT
GATCGCGACG TCCGGGTTCG GGCTGGCGAC GGTCTGGAGA TGCAGGAGCC TGACTCGCTG
GATGTGGTGC TGTGCAATCC GCCCTTCCAC CAGCAGCAAG TGGTCGGCGA CTTTCTCGCC
TGGCGGATGT TTCTGCAGGC GCGTGCCGCG CTGGTGACCG GCGGGGCGCT GTACATCGTC
GGCAATCGCC ACCTGGGTTA TCACACCAAG CTGTCGCGCC TGTTCCGCGG CGTCGAACAA
GTGGCCGCCA CGCCGAAATT CGTGATTCTG AAAGCCCGCA AGTAA
 
Protein sequence
MPLLISPFAE LDLIRQPEQQ DEPLQAFDAA DEYLLNHVAQ AGLSLPSRVL VLNDSFGALA 
ASLAPHATVI SSTDSFLAAQ ALEKNLARNG MSYDAVPHIP ASEALQGPFD WVLIRVPKTL
ALLEEQLIRL QGQLAPGARV IAAAMVKHLP RSAGDLLEEY VGPVQASLAV KKARLLFATP
QPMEVRTSPY PTRYRLEEPA IELLNHANVF CRDGLDIGTR AFLPHLPKNL GTARVADLGC
GNGVLAIASA LDNPQAHYTL VDESFMAVKS AAENWRATLG DRDVRVRAGD GLEMQEPDSL
DVVLCNPPFH QQQVVGDFLA WRMFLQARAA LVTGGALYIV GNRHLGYHTK LSRLFRGVEQ
VAATPKFVIL KARK