| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4278 |
|---|
| Symbol | |
|---|
| ID | 3369818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5102827 |
|---|
| End bp | 5103060 |
|---|
| Gene Length | 234 bp |
|---|
| Protein Length | 77 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637654638 |
|---|
| Product | regulatory protein, LuxR |
|---|
| Protein accession | YP_237346 |
|---|
| Protein GI | 66047505 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.61759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAA TGGACATAAA TTTCTCACAG CCCTCGCCAG CAAAAAACCT GACTCAGAGA
GAAATCGAAG TCCTCAAGTG GTCCGCCGAA GGCAAAACAG CTGGCGACAT CGCAATGATC
CTCTGCCTGA AGGAACGCAC CATTCACTTC CACATTGCCA GTGCCATTCA AAAAATGGGC
GTTTGCAACA AGACGGCTGC CGCCGTACAA GCCGCGCTCA GCGGGATGTT CTGA
|
|---|
| Protein sequence | MNTMDINFSQ PSPAKNLTQR EIEVLKWSAE GKTAGDIAMI LCLKERTIHF HIASAIQKMG
VCNKTAAAVQ AALSGMF
|
|---|
| |