Gene Psyr_4276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4276 
SymbolmscL 
ID3369816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5101077 
End bp5101523 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content58% 
IMG OID637654636 
Productlarge-conductance mechanosensitive channel 
Protein accessionYP_237344 
Protein GI66047503 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.348387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGC TTAAGGAATT CAAGGCATTC GCGGTCAAAG GCAACGTAGT TGATATGGCC 
GTCGGTATTA TCATCGGCGC GGCATTCGGC AAGATCGTTT CTTCGTTCGT CGGCGATGTC
ATCATGCCGC CGCTGGGCCT GTTGATTGGC GGTGTCGACT TCAGCGACCT GGCCGTCACC
CTGCGTCCTG CGCAAGGGAC TGCACCTGCG GTACTGCTGG CGTACGGCAA GTTCATCCAG
ACCGTCATCG ACTTCATCAT CGTCGCGTTC GCGATATTCA TGGGCGTCAA GGCCATCAAC
CGCCTGAAAC GCGAAGAAGC CAAAGCCCCT ACCCTGCCAC CAACGCCCTC CAAGCAGGAA
ATCCTGCTGG GCGAGATTCG CGACCTGCTC AAAGAGCAGA GCAAACCGGC AGCGCCCATT
ACCGTGGATC CTGCGCGTAC GCTTTGA
 
Protein sequence
MSVLKEFKAF AVKGNVVDMA VGIIIGAAFG KIVSSFVGDV IMPPLGLLIG GVDFSDLAVT 
LRPAQGTAPA VLLAYGKFIQ TVIDFIIVAF AIFMGVKAIN RLKREEAKAP TLPPTPSKQE
ILLGEIRDLL KEQSKPAAPI TVDPARTL