Gene Psyr_4270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4270 
SymbolglyA 
ID3369810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5094122 
End bp5095375 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content62% 
IMG OID637654630 
Productserine hydroxymethyltransferase 
Protein accessionYP_237338 
Protein GI66047497 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGCC GTGATTTGAC TATCGCCAAG TACGACGCCG ATCTGTTTGC CGCCATGGAG 
CAAGAAGCTC TGCGTCAGGA AGAACACATC GAGCTGATTG CCTCGGAAAA CTACACCAGT
CCGGCCGTCA TGGAAGCTCA GGGCTCGGCC CTGACCAACA AGTACGCCGA AGGCTATCCA
GGCAAGCGCT ACTACGGTGG TTGCGAGTAC GTCGACATTA TCGAGCAACT GGCCATCGAC
CGCGCCAAGG AACTGTTCGG CGCTGATTAC GCCAACGTCC AGCCACACGC CGGTTCGCAA
GCCAACTCGG CGGTCTACCT GGCCCTGCTG CAAGGCGGCG ACACCATTCT GGGCATGAGC
CTGGCTCACG GTGGTCACCT GACCCACGGC GCCAGCGTTT CGTCCTCGGG CAAGCTGTAC
AACGCCGTTC AGTACGGCAT CGATGCCAAC GGCATGATCG ACTACGACGA AGTCGAGCGC
CTGGCCGTCG AGCACAAGCC AAAAATGATC GTCGCCGGTT TCTCTGCCTA CTCGCAGATC
CTCGACTTCC CGCGCTTCCG CGCCATCGCT GACAAGGTCG GTGCCTACCT GTTCGTCGAC
ATGGCGCACG TCGCCGGTCT GGTCGCCGCA GGCGTCTACC CGAACCCGGT GCCATTCGCC
GACGTCGTGA CCACCACCAC GCACAAGACC CTGCGCGGTC CGCGTGGCGG CCTGATCCTG
GCGCGCGCCA ACGCCGAGAT CGAGAAGAAG CTGAACTCGG CGGTGTTCCC TGGCTCCCAG
GGCGGCCCGC TGGAGCACGT CATCGCGGCC AAGGCCGTGT GCTTCAAGGA AGCGCTGCAG
CCTGAGTTCA AGACCTACCA GCAGCAAGTG GTGAAGAACG CCAAGGCCAT GGCCGGCGTG
TTCATCGAGC GTGGCTTCGA CGTCGTTTCC GGCGGTACCG AGAACCACCT GTTCCTGCTG
TCGCTGATCA AACAGGACAT CTCCGGTAAA GACGCTGACG CCGCTCTGGG TCGCGCCTTC
ATCACCGTCA ACAAGAACTC CGTACCGAAC GACCCACGCT CCCCGTTCGT CACCTCCGGC
CTGCGCTTCG GCACCCCGGC AGTGACCACT CGCGGCTTCA AGGAAGCTGA GTGCAAGGAA
CTGGCCGGCT GGATCTGCGA CATCCTGGCT GACCTGAACA ACGAAGCCGT GATCGACGCG
GTTCGTGAGA AGGTCAAGGC CATCTGCGCC AAGCTGCCGG TTTACGGCGC TTGA
 
Protein sequence
MFSRDLTIAK YDADLFAAME QEALRQEEHI ELIASENYTS PAVMEAQGSA LTNKYAEGYP 
GKRYYGGCEY VDIIEQLAID RAKELFGADY ANVQPHAGSQ ANSAVYLALL QGGDTILGMS
LAHGGHLTHG ASVSSSGKLY NAVQYGIDAN GMIDYDEVER LAVEHKPKMI VAGFSAYSQI
LDFPRFRAIA DKVGAYLFVD MAHVAGLVAA GVYPNPVPFA DVVTTTTHKT LRGPRGGLIL
ARANAEIEKK LNSAVFPGSQ GGPLEHVIAA KAVCFKEALQ PEFKTYQQQV VKNAKAMAGV
FIERGFDVVS GGTENHLFLL SLIKQDISGK DADAALGRAF ITVNKNSVPN DPRSPFVTSG
LRFGTPAVTT RGFKEAECKE LAGWICDILA DLNNEAVIDA VREKVKAICA KLPVYGA