Gene Psyr_4257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4257 
Symbol 
ID3369797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5074073 
End bp5074561 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content51% 
IMG OID637654617 
Producthypothetical protein 
Protein accessionYP_237325 
Protein GI66047484 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTT TTTTTGAAAA TGCCATGTAC GCATCGCGCT GGCTGCTGGC GCCGATCTAT 
TTCGGCCTCT CCCTTGGTCT GTTGGCGTTG TGTCTGAAGT TTTTCCAGGA AATCTTTCAC
GTCATTCCCA ACATCTTCTC GCTGGCCGAA GCTGACCTGA TTCTGGTGTT GTTGTCGCTG
ATCGACATGG CGCTGGTCGG TGGCTTGCTG GTGATGGTGA TGATCTCCGG CTACGAGAAC
TTCGTATCGC AACTGGACAT CGATGAGGAC AAGGAAAAGC TCAACTGGCT GGGCACTATG
GATTCGTCTT CGCTGAAGAT GAAAGTTGCA GCATCGATTG TCGCGATTTC TTCCATCCAC
CTGTTGCGGG TGTTCATGGA CGCCACCAAC ATCAAGCCCG AATACCTGAT GTGGTACGTG
ATTATCCACA TGACGTTCGT GATATCGGCG TTTGCGATGG GCTATCTGGA CAAGGTCACC
AAGCACTGA
 
Protein sequence
MERFFENAMY ASRWLLAPIY FGLSLGLLAL CLKFFQEIFH VIPNIFSLAE ADLILVLLSL 
IDMALVGGLL VMVMISGYEN FVSQLDIDED KEKLNWLGTM DSSSLKMKVA ASIVAISSIH
LLRVFMDATN IKPEYLMWYV IIHMTFVISA FAMGYLDKVT KH