| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4242 |
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| Symbol | dppF |
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| ID | 3369782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5054531 |
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| End bp | 5055505 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637654602 |
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| Product | dipeptide transporter ATP-binding subunit |
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| Protein accession | YP_237310 |
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| Protein GI | 66047469 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.410741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCG TACTGACCGC CCGCGACCTT ACCCGTCACT ACGAAGTTTC CCGCGGCCTG
TTCAAGGGCT CGGCGCTGGT GCGTGCGCTT AACGGGGTGT CCTTTGAACT GGAAGCCGGC
AAGACTCTGG CTGTGGTCGG CGAGTCCGGC TGTGGCAAAT CGACACTGGC GCGCGCGCTG
ACACTGATTG AAGAGCCGTC ATCCGGCTCG CTCAAAATCG CCGGTCAGGA AGTTGCCGGG
GCCAGCAAGG CCGAGCGCAA GCAGTTGCGC AAGGACGTGC AGATGGTCTT CCAGAGCCCT
TATGCCTCGC TCAACCCAAG GCAGAAAGTC GGGGATCAGC TCGGCGAGCC GCTGCTGATC
AACACCAATC TGTCGGCCGC CGAACGCCGC GAGAAAGTGC AGGCGATGAT GGCCCAGGTC
GGTTTGCGCC CTGAGCACTA TCAGCGCTAC CCGCACATGT TCTCCGGCGG TCAGCGTCAG
CGTATCGCGC TGGCCAGGGC AATGATGCTG CAGCCCAAAG TGCTGGTAGC GGACGAGCCG
ACTTCAGCGC TGGACGTATC GATTCAGGCC CAGGTACTGA ACCTGTTCAT GGACCTGCAG
CAGGAATTCA ACACCGCCTA TGTGTTCATC TCCCACAACC TGTCGGTGGT GCGTCATGTC
GCCGATACGG TATTGGTGAT GTACCTGGGC CGGCCTGCGG AAATGGGTCC CAAGGAAGAG
ATCTACAACC GTCCGCTGCA CCCGTACACG CAGGCGCTGC TGTCGGCGAC CCCGACCATC
CACCCGGACC CGCTCAAGCC GAAGATCAAG ATCGTCGGCG AGCTGCCCAA TCCGCTCAAC
CCGCCAAGCG GCTGCGCCTT CCACAAGCGC TGCCCCTATG CGACCGAGCG TTGTGCAGCC
GAAGTGCCGG AGCTGCGTCT GGTGGATAAC CGCCAGGTGG CGTGCCATTA CGCCGAGCAA
TTCGTAGCGG CGTAG
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| Protein sequence | MSVVLTARDL TRHYEVSRGL FKGSALVRAL NGVSFELEAG KTLAVVGESG CGKSTLARAL
TLIEEPSSGS LKIAGQEVAG ASKAERKQLR KDVQMVFQSP YASLNPRQKV GDQLGEPLLI
NTNLSAAERR EKVQAMMAQV GLRPEHYQRY PHMFSGGQRQ RIALARAMML QPKVLVADEP
TSALDVSIQA QVLNLFMDLQ QEFNTAYVFI SHNLSVVRHV ADTVLVMYLG RPAEMGPKEE
IYNRPLHPYT QALLSATPTI HPDPLKPKIK IVGELPNPLN PPSGCAFHKR CPYATERCAA
EVPELRLVDN RQVACHYAEQ FVAA
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