| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4232 |
|---|
| Symbol | |
|---|
| ID | 3369772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5040331 |
|---|
| End bp | 5041044 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637654592 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_237300 |
|---|
| Protein GI | 66047459 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3471] Predicted periplasmic/secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAACC TTCGCCCTGC CGCCACCCTC ATCGCGCTGG CCGCTGCTCT GTCCAGCCTG
CCCGCCATGG CTGAAGAAGC CCGTTACAAC CAGATTTCAT TGCGCGCCGA GGTCAACCAG
GAGGTGCAGC GCGACCTGAT GCTCGTCACG CTGTACACCG AAGCGCAGGA CAGCGATCCG
GCCAAACTGG CCGCGCAGAT CACCGAGACG CTGAACAAGG CATTGGGTCA GGCGCGCCAG
GTCAAGGATG TGAAGATCCG CCAGGGCAGC CGCAACAGCT ACCCGGTCTA CGACGATAAA
GGCCAGAAGA TCACCGGCTG GCGTGAACGC GCCGAACTGC GCCTGGAAAG TGCAGACTTC
GCCGTGCTGT CCAAGCTGAC CGGCGAGCTG CTGACCGACC TGAAAATGGG CGGCATGGAC
TTCTCGATCT CGCCATCGAC GCGCAAGACC AGCGAAGACG CCCTGCTCAA GGACGCGGTG
ACTGCGTTCA AGGCTCGCGC TCAACTGGTC ACCGAAGCGT TGGGTGGTAC GGGCTACAAG
CTGGTCAACC TGAACCTGAA TACCTCGGGC TACCCGCAGC CGTATCTGCG CGCGCCGGTC
ATGATGATGG CAAAGTCTTC GCGTGCAGAC TCGGCACCGA CACCCGATGT CGAAGCGGGC
ACCAGCCAGG TCAGCGTTGC GGCAGATGGC GTAATTGAAG TCGCGATTCC GTGA
|
|---|
| Protein sequence | MFNLRPAATL IALAAALSSL PAMAEEARYN QISLRAEVNQ EVQRDLMLVT LYTEAQDSDP
AKLAAQITET LNKALGQARQ VKDVKIRQGS RNSYPVYDDK GQKITGWRER AELRLESADF
AVLSKLTGEL LTDLKMGGMD FSISPSTRKT SEDALLKDAV TAFKARAQLV TEALGGTGYK
LVNLNLNTSG YPQPYLRAPV MMMAKSSRAD SAPTPDVEAG TSQVSVAADG VIEVAIP
|
|---|
| |