Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4228 |
Symbol | |
ID | 3369768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5035648 |
End bp | 5036397 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654588 |
Product | transcriptional regulator GntR |
Protein accession | YP_237296 |
Protein GI | 66047455 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATC AAAGCGCTCT GCCCCGCGCC CGCAGAAAAC ACCGCAGCCT CGCGCAGGAG CTGGTGACAG AGCTGTCCGA GCGTATTCGC AGCGGTCAGC TCAAGCGCGG CGACAAACTG CCCACCGAAT CCGCAATCAT GGAAGAGCAG GGCGTCAGCA GGACGGTCGT GCGTGAGGCG ATTTCGCGTC TGCAGGCCTC CGGTCTGGTC GAGACCCGTC ACGGCATCGG CACCTTCGTG CTCGATACGC CAAGCCCCAG TGGCTTCAGG ATTGACCCGG CGACCATCGT CACCCTGCGC GATGTACTGG CGATTCTCGA ATTGCGCATC AGCCTTGAAG TCGAGTCGGC AGGCCTGGCA GCCCAGCGGC GTAGTGATGA ACAACTGGCA GCCATGCGTT CGGCGCTGGA CGCGCTCAAT GAAAGTGCGG CACACGCCAC CGATGCCGTG GCCTCGGACT TCCAGTTCCA TCTGCAGATT GCCTTGTCGA CCGGCAATCG TTACTTCACT GACATCATGA CCCACCTGGG CACCAGCATC ATCCCGCGTA CCCGGCTCAA TTCCGCGCGT CTGGCACATG ATGACCAGCA GCACTATATG AATCGGCTGA GCCGCGAGCA CGAAGAAATC TTCGACGCCA TCGCCCGCCA GGATTCCGAT GCGGCCCGCG CCGCCATGCG CCTGCACCTG ACCAACAGCC GCGAACGCCT GCGCCATGCG CATGAAGAGG CTGAATCGCA GCGGGCTTGA
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Protein sequence | MENQSALPRA RRKHRSLAQE LVTELSERIR SGQLKRGDKL PTESAIMEEQ GVSRTVVREA ISRLQASGLV ETRHGIGTFV LDTPSPSGFR IDPATIVTLR DVLAILELRI SLEVESAGLA AQRRSDEQLA AMRSALDALN ESAAHATDAV ASDFQFHLQI ALSTGNRYFT DIMTHLGTSI IPRTRLNSAR LAHDDQQHYM NRLSREHEEI FDAIARQDSD AARAAMRLHL TNSRERLRHA HEEAESQRA
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