Gene Psyr_4212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4212 
Symbol 
ID3369752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand- 
Start bp5017555 
End bp5018535 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content63% 
IMG OID637654572 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 
Protein accessionYP_237280 
Protein GI66047439 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCC CAATACTGCT GAACGTCAAT GATCTGGTGG TGCGCTTCCC GGCACCCGGC 
TCGGGTTTCA TGGGCCTCAA CAAGCGTTGG GTGCATGCCG TCAACGGTGT GTCACTGAGC 
ATTTGCGCGG GTGAAACGCT GGGGCTGGTC GGCGAGTCCG GCAGCGGCAA GAGCACGCTG 
GGCCGCGCCA TTCTGCGCCT GAATGACATT ACCTCCGGGC AGATCGTCTT CGATGACGTC 
GACATGGCCC AGGGCAGCGG TATCAATCTG CAACGCCTGC GCAGCGAAAC CGCGATGGTC 
TTTCAGGACC CGTCCTCTTC GCTCAATCCG CGCATGACCA TCGGTGCGAC GCTGGCCGAG 
GTGCTTGCCG TGCAGCGCAA GGTCGCCACT TCCGACATTC CGGCGCGGGT CACCGAGCTG 
CTCGACATGG TCGGTCTGCG GCCCGAATTT GCCGAACGCA AGCCGGGTGC CTTGAGCGGC 
GGACAATGTC AGCGTGTCGG TATCGCTCGC GCGCTGGCCA TCGAGCCACG GCTGATCATT 
GCCGACGAAT GCGTGGCGGC GCTGGACGTT TCGATTCAGG GGCAGATCAT CAACCTGCTG 
CTGGAGCTGC GCCAGCGCAT GAACCTGGCG ATTCTGTTCA TCGCCCATGA CCTGGCCATC 
GTGCGTCGCC TGTGTGATCG GGTGGCGGTG ATGTACCTGG GCAGAATCGT TGAAGAAGGC 
CCGGTCGAGG ATGTCTTTGT TTCGCCGCGC CACCCCTATA CCGCGGCGCT GATTCAGGCG 
ATTCCGGAAA TCGATCCGGA TCGTCCTTTG CTCGGCGAGC CATTGCAGGG TGAGCCGCCA 
AGCCCCCTGA ATTTGCCCGA CGGCTGCGCG TTTCATCCGC GTTGCCGGTT TGCCAGGCCG 
ACCTGCTCCA GCGTCGCGCC ACCGACCCGG CATGTCGGCC AGCAGCGCTA CGACTGCGTG 
CTGGAAGCCC CGGTTTTTTG A
 
Protein sequence
MSGPILLNVN DLVVRFPAPG SGFMGLNKRW VHAVNGVSLS ICAGETLGLV GESGSGKSTL 
GRAILRLNDI TSGQIVFDDV DMAQGSGINL QRLRSETAMV FQDPSSSLNP RMTIGATLAE 
VLAVQRKVAT SDIPARVTEL LDMVGLRPEF AERKPGALSG GQCQRVGIAR ALAIEPRLII 
ADECVAALDV SIQGQIINLL LELRQRMNLA ILFIAHDLAI VRRLCDRVAV MYLGRIVEEG 
PVEDVFVSPR HPYTAALIQA IPEIDPDRPL LGEPLQGEPP SPLNLPDGCA FHPRCRFARP 
TCSSVAPPTR HVGQQRYDCV LEAPVF