Gene Psyr_4201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4201 
Symbol 
ID3369740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4996680 
End bp4997114 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content59% 
IMG OID637654561 
Productcyclase/dehydrase 
Protein accessionYP_237269 
Protein GI66047428 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.546802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACGC ATATACAACG CTCTGCTTTA CTGCCGTACC CGGCCGGGTT CCTTTATGAC 
CTGGTCAATG ATGTGGCTCG TTATCCCGAG TTTCTGCCGT GGTGTTCGTC CGCTACCGTG
GTTGAAGCCA GTGAGGCGCA GATGCGCGCC AGCCTGGAGA TCGCCAAGGG GGGGCTGAGC
CAGAAGTTCA TGACGCGCAA CACGCTGGTT CCCGGCGAGT CGATCGTGAT GGACCTGGTC
GAAGGTCCGT TCGAACAGTT CCACGGTGTC TGGACATTCA AGCCGCTGGG CGAGAAAGCC
TGCAAGATCA GTCTGGATCT GTCCTTCGAT TATGCCGGCA CCATCGTTCG CGCCACGCTG
GGGCCGCTGT TCAATCAGGC AGCCAACACG CTGGTGGATG CGTTCTGCCA GCGAGCGAAA
GAGCTGCATG GCTGA
 
Protein sequence
MTTHIQRSAL LPYPAGFLYD LVNDVARYPE FLPWCSSATV VEASEAQMRA SLEIAKGGLS 
QKFMTRNTLV PGESIVMDLV EGPFEQFHGV WTFKPLGEKA CKISLDLSFD YAGTIVRATL
GPLFNQAANT LVDAFCQRAK ELHG