Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4201 |
Symbol | |
ID | 3369740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4996680 |
End bp | 4997114 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637654561 |
Product | cyclase/dehydrase |
Protein accession | YP_237269 |
Protein GI | 66047428 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.546802 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACGC ATATACAACG CTCTGCTTTA CTGCCGTACC CGGCCGGGTT CCTTTATGAC CTGGTCAATG ATGTGGCTCG TTATCCCGAG TTTCTGCCGT GGTGTTCGTC CGCTACCGTG GTTGAAGCCA GTGAGGCGCA GATGCGCGCC AGCCTGGAGA TCGCCAAGGG GGGGCTGAGC CAGAAGTTCA TGACGCGCAA CACGCTGGTT CCCGGCGAGT CGATCGTGAT GGACCTGGTC GAAGGTCCGT TCGAACAGTT CCACGGTGTC TGGACATTCA AGCCGCTGGG CGAGAAAGCC TGCAAGATCA GTCTGGATCT GTCCTTCGAT TATGCCGGCA CCATCGTTCG CGCCACGCTG GGGCCGCTGT TCAATCAGGC AGCCAACACG CTGGTGGATG CGTTCTGCCA GCGAGCGAAA GAGCTGCATG GCTGA
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Protein sequence | MTTHIQRSAL LPYPAGFLYD LVNDVARYPE FLPWCSSATV VEASEAQMRA SLEIAKGGLS QKFMTRNTLV PGESIVMDLV EGPFEQFHGV WTFKPLGEKA CKISLDLSFD YAGTIVRATL GPLFNQAANT LVDAFCQRAK ELHG
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