Gene Psyr_4189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4189 
Symbol 
ID3369728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4982832 
End bp4983143 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content53% 
IMG OID637654549 
Producthypothetical protein 
Protein accessionYP_237257 
Protein GI66047416 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.384209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.811113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCA CTCCAGAGCA GAAGAAACAA TACAAATCCA TTGGCCACCA TCTGAAACCG 
GTATTGATCG TGGCTGACAA TGGTTTGACT GAAGGTGTAC TTGCAGAGCT TGAACGCGCA
CTGAGCGATC ATGAGCTGAT CAAGATCAAG CTCAACATCC TCGACCGCGA AAGCCGTCTC
GGCGCCATCG CAGAACTGTG CAAGGCCGGT TCTGCCGACC TGGTTCAGGT CATCGGCAAA
ATGGCGTTGA TCTATCGCAA GAACCCAAAG GTAAACAAGC AACTGTCCAA CGTCCACCGC
GCGCACGGAT AA
 
Protein sequence
MPLTPEQKKQ YKSIGHHLKP VLIVADNGLT EGVLAELERA LSDHELIKIK LNILDRESRL 
GAIAELCKAG SADLVQVIGK MALIYRKNPK VNKQLSNVHR AHG