Gene Psyr_4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4185 
SymbolglmM 
ID3369724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4977760 
End bp4979103 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content61% 
IMG OID637654545 
Productphosphoglucosamine mutase 
Protein accessionYP_237253 
Protein GI66047412 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01455] phosphoglucosamine mutase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.599163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGCA GAAAATATTT CGGAACCGAC GGCATTCGCG GTCGTGTAGG GCAATTCCCG 
ATCACTCCCG AGTTCATGCT GAAACTGGGT TGGGCCGCCG GCATGGCGTT TCGCAAGATG
GGCGCCTGCC GGATTCTCGT CGGCAAGGAC ACGCGCATCT CCGGCTACAT GTTCGAGTCC
GCCCTGGAGG CCGGCCTTTC TGCTGCGGGT GCCGACGTTC TCTTGCTGGG CCCGATGCCG
ACACCGGCCA TCGCCTACCT GACACGTACC TTCCATGCCG AGGCAGGCAT CGTCATCAGC
GCCTCGCATA ACCCGCACTA CGACAACGGC ATCAAGTTCT TCTCCGGTCA GGGCACCAAG
CTCCCTGACG AGATCGAGAT GATGATCGAA GAGCTGCTCG ATGCGCCGAT GACCGTTGCC
GAGTCCGAGA ACCTCGGCAA GGTCTCGCGG ATCAACGATG CGGCCGGGCG TTACATCGAA
TTCTGCAAAA GCAGCGTGCC TACCAGCACC GACTTCGCCG GCCTCAAGGT CGTCATCGAC
TGCGCCCACG GTGCGACCTA CAAGGTGGCG CCCAACGTAT TTCGTGAGCT GGGCGCGCAG
GTCGTGGTGC TTTCCGCGCA ACCTGACGGG CTCAACATCA ACAAGGACTG CGGCTCCACG
CACATGGAAG CCCTGCAGGC GGCCGTGCTT GCCGAGCATG CGGATATGGG CATCGGTTTC
GACGGTGACG GCGACCGCGT GTTGATGGTC GATCACACCG GGACCATCGT CGATGGCGAC
GAATTGCTCT ACATCATCGC CCGCGACCTG CATGAGCGGG GTCGCTTGCA GGGCGGCGTC
GTCGGCACAT TGATGAGTAA CCTGGGGCTT GAACTGGCCC TGGCCGAGCA GGGCATTCCC
TTTGTTCGGG CCAATGTCGG TGACCGTTAT GTGATCGCCG AACTGCTCGA GCGCAACTGG
CAGATTGGCG GTGAAAACTC CGGTCATATA GTCTGTTTCC AGCACGCTAC CACCGGTGAC
GCGATTATCG CCTCATTGCA GGTGATACTG GCCCTGCGTC GCAGTGGTGT AAGCCTGGCC
GAAGCGCGTC TGAAATTGCG CAAGTGCCCG CAAATCCTGA TCAACGTCCG CTTCGCCGGG
TCGGGTGTTG ACCCGGTTTC GCATCCGTCG GTCAAGGAAG CCTGCGCCCG TGTCACCGAG
CAGATGGCCG GGCGTGGCAG GGTGCTGCTG CGCAAATCGG GTACCGAGCC GTTGGTGCGC
GTCATGGTCG AAGGCGAGGA CGAAACGCAG GTCAGGGCGT ACGCCGAAGA ACTCGCAAAA
CTGGTTACTG AAGTTTGCGC CTGA
 
Protein sequence
MTSRKYFGTD GIRGRVGQFP ITPEFMLKLG WAAGMAFRKM GACRILVGKD TRISGYMFES 
ALEAGLSAAG ADVLLLGPMP TPAIAYLTRT FHAEAGIVIS ASHNPHYDNG IKFFSGQGTK
LPDEIEMMIE ELLDAPMTVA ESENLGKVSR INDAAGRYIE FCKSSVPTST DFAGLKVVID
CAHGATYKVA PNVFRELGAQ VVVLSAQPDG LNINKDCGST HMEALQAAVL AEHADMGIGF
DGDGDRVLMV DHTGTIVDGD ELLYIIARDL HERGRLQGGV VGTLMSNLGL ELALAEQGIP
FVRANVGDRY VIAELLERNW QIGGENSGHI VCFQHATTGD AIIASLQVIL ALRRSGVSLA
EARLKLRKCP QILINVRFAG SGVDPVSHPS VKEACARVTE QMAGRGRVLL RKSGTEPLVR
VMVEGEDETQ VRAYAEELAK LVTEVCA