| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4184 |
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| Symbol | tpiA |
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| ID | 3369723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4976938 |
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| End bp | 4977693 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637654544 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_237252 |
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| Protein GI | 66047411 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.572392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGCC CAATGGTAGC TGGTAACTGG AAAATGCACG GTACCCGCGC CAGCGTCGCT
GAGCTGATCG AGGGTTTGTG CAAGCAGTCG TTGCCAGGCA GCGTCGATAT CGCCGTGATG
CCTGCCAGTC TGTTTACCTG TCAGGTGGTC GATGGGCTCA AGGCCACGTC GATCATCGTC
GGTGCGCAGG ACGCAGCCAT TCAGGCTGAG CAGGGCGCGC TGACGGGTGA AGTTGCATCT
AGCCAGCTGG CTGATGCAGG TTGCAAGCTG GTACTTGTCG GGCACTCCGA GCGTCGTCAG
TTGATTGGCG AACAGGATGA TGTTCTGAAC AAAAAGTTTG CGGCAATCCA GGCGAAAGGT
CTGACACCTG TGCTTTGCGT AGGTGAAACC CTGGAAGAGC GCAAGGCGGG GCAAACGCTT
GAAGTGGTAG GGCGTCAGCT GGACAGTGTT ATCGCCGAGT TTGGCGTCAA TGCACTGGTC
AACGCCGTCA TTGCCTACGA GCCGGTCTGG GCCATTGGCA CCGGATTGAC TGCTTCGCCT
CAGGAAGCGC AGGAAGTGCA CGCAGCCATC CGTGCGCAAC TGGCAAAAGA GAATGCCGAA
GTCGCACAAG GCGTGCGACT TCTCTATGGC GGCAGCGTGA AGGCGGCCAA TGCGGTCGAG
CTCTTCAGCA TGCCGGATAT CGATGGGGGG CTCATTGGTG GAGCTTCCCT GAATGCAGAT
GAGTTCGGTG CGATCTGTCG CGCCGCGGGA AACTGA
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| Protein sequence | MRRPMVAGNW KMHGTRASVA ELIEGLCKQS LPGSVDIAVM PASLFTCQVV DGLKATSIIV
GAQDAAIQAE QGALTGEVAS SQLADAGCKL VLVGHSERRQ LIGEQDDVLN KKFAAIQAKG
LTPVLCVGET LEERKAGQTL EVVGRQLDSV IAEFGVNALV NAVIAYEPVW AIGTGLTASP
QEAQEVHAAI RAQLAKENAE VAQGVRLLYG GSVKAANAVE LFSMPDIDGG LIGGASLNAD
EFGAICRAAG N
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