| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4176 |
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| Symbol | |
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| ID | 3369713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4967358 |
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| End bp | 4969463 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637654534 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_237244 |
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| Protein GI | 66047403 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.310509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCGG TAATCAAAAA GTTTCAGTTC GGTCAATCGA CCGTAACCCT CGAGACAGGC
CGTATCGCCC GTCAAGCCTC TGGTGCAGTA TTGGTCACCG TTGACGACGA CGTCAGCGTA
CTCGTGACTG TGGTCGGCGC CAAACAGGCT GACGCTGGCA AAGGCTTCTT CCCTCTGTCC
GTGCACTATC AGGAAAAAAC CTACGCTGCC GGCAAGATTC CTGGTGGTTT CTTCAAGCGT
GAAGGCCGTC CTTCCGAGAA AGAAACCCTG ACTTCGCGCC TGATCGACCG TCCGATCCGC
CCGTTGTTTC CAGAAGGCTT CATGAACGAA GTGCAGGTCG TCTGCACCGT CGTCTCCACC
AGCAAGAAAA TCGATCCGGA CATCGCTGCG ATGATCGGTA CTTCGGCTGC CCTGGCCATC
TCCGGTATCC CGTTTGACGG TCCGGTCGGT GCTGCCCGCG TTGCTTTCCA CGAAAGCACC
GGCTACCTGT TGAACCCGAC TTACGAGCAG CTGCAGGCTT CGAGCCTGGA CATGGTCGTT
GCCGGTACTT CCGAAGCCGT TCTGATGGTC GAGTCGGAAG CCAAAGAGCT GACCGAAGAC
CAGATGCTGG GCGCCGTGCT GTTCGCGCAT GACGAGTTCC AGGTCGTGAT CAACGCCATC
AAGGAACTGG CTGCCGAAGC CGCCAAGCCT ACCTGGGACT GGCAGCCAAA GCCTGAAGCG
ACTGCACTGC TGGGCGCTAT CCGTGCCGAG TTCGGCGACG CGATCTCCCA GGCTTACACC
ATCACCGTCA AAGCCGACCG CTATGCGCGT CTGGGCGAAC TGAAAGATCA GGTCGTTGCC
AAGCTCGCTG TCGAAGACGG CAGCCCGTCT GCCAGCGAAG TCAAAGCGGC TTTCGGCGAA
ATCGAATACC GCACCGTTCG CGAAAACATC GTTAACGGCA AGCCGCGTAT CGATGGTCGT
GACACGCGCA CCGTTCGTCC TCTGAACATC GAAGTCGGCG TTCTGCCGAA GACTCACGGT
TCGGCACTGT TCACCCGTGG CGAAACTCAG GCGCTGGTGG TTGCCACGCT GGGTACTGCA
CGTGACGCAC AGCTGCTCGA TACCCTCGAA GGCGAGAAGA AAGACCCCTT CATGCTGCAC
TACAACTTCC CTCCGTTCTC GGTGGGCGAG TGTGGTCGCA TGGGCGGCGC AGGTCGTCGT
GAAATCGGTC ACGGCCGTCT GGCCCGTCGC AGTGTCCAGG CCATGCTGCC AGGCGCTGAC
GTGTTCCCGT ACACCATCCG TGTCGTGTCG GAAATCACCG AGTCCAACGG CTCCAGCTCC
ATGGCTTCGG TCTGCGGTGC TTCCCTGGCT CTGATGGACG CTGGTGTGCC GATGAAGGCG
CCGGTTGCCG GTATCGCCAT GGGTCTGGTC AAGGAAGGCG AGAAGTTCGC GATTCTGACC
GACATCCTGG GTGACGAAGA CCACCTGGGC GACATGGACT TCAAGGTAGC CGGTACCTCC
AAAGGTGTTA CCGCGCTGCA GATGGACATC AAGATCAAAG GCATCACCGA AGAGATCATG
GAGATCGCCC TGGGCCAGGC CCTGGAAGCT CGCCTGAATA TCCTCGGCCA GATGAACCAG
ATCATTGGTC AGTCGCGTAA CGAACTGTCG GCCAACGCTC CGACCATGAT CGCGATGAAG
ATCGACACCG ACAAGATCCG TGACGTGATC GGCAAGGGTG GCGCAACCAT CCGTGCCATC
TGCGAAGAGA CCAAGGCTTC GATCGACATC GAAGACGACG GCTCGATCAA GATCTTCGGC
GAGTCCAAGG AAGCGGCTGA GGCTGCACGT CAGCGCGTTC TGGGCATCAC CGCAGAAGCG
GAAATCGGCA AGATCTACAT CGGCAAGGTT GAGCGCATCG TCGATTTCGG CGCGTTCGTC
AACATCCTGC CGGGTAAGGA CGGTCTGGTT CATATCTCGA TGCTGAGCGA TGCTCGCGTA
GAGAAAGTGA CCGACATCCT CAAAGAAGGT CAGGAAGTCG AAGTACTGGT ACTGGACGTG
GACAACCGCG GCCGTATCAA GCTGTCGATC AAGGACGTAG CCGCAGCGAA AGCGTCGGGC
GTCTGA
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| Protein sequence | MNPVIKKFQF GQSTVTLETG RIARQASGAV LVTVDDDVSV LVTVVGAKQA DAGKGFFPLS
VHYQEKTYAA GKIPGGFFKR EGRPSEKETL TSRLIDRPIR PLFPEGFMNE VQVVCTVVST
SKKIDPDIAA MIGTSAALAI SGIPFDGPVG AARVAFHEST GYLLNPTYEQ LQASSLDMVV
AGTSEAVLMV ESEAKELTED QMLGAVLFAH DEFQVVINAI KELAAEAAKP TWDWQPKPEA
TALLGAIRAE FGDAISQAYT ITVKADRYAR LGELKDQVVA KLAVEDGSPS ASEVKAAFGE
IEYRTVRENI VNGKPRIDGR DTRTVRPLNI EVGVLPKTHG SALFTRGETQ ALVVATLGTA
RDAQLLDTLE GEKKDPFMLH YNFPPFSVGE CGRMGGAGRR EIGHGRLARR SVQAMLPGAD
VFPYTIRVVS EITESNGSSS MASVCGASLA LMDAGVPMKA PVAGIAMGLV KEGEKFAILT
DILGDEDHLG DMDFKVAGTS KGVTALQMDI KIKGITEEIM EIALGQALEA RLNILGQMNQ
IIGQSRNELS ANAPTMIAMK IDTDKIRDVI GKGGATIRAI CEETKASIDI EDDGSIKIFG
ESKEAAEAAR QRVLGITAEA EIGKIYIGKV ERIVDFGAFV NILPGKDGLV HISMLSDARV
EKVTDILKEG QEVEVLVLDV DNRGRIKLSI KDVAAAKASG V
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